Pairwise Alignments

Query, 321 a.a., transcriptional regulator LeuO from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  119 bits (299), Expect = 7e-32
 Identities = 86/294 (29%), Positives = 134/294 (45%), Gaps = 3/294 (1%)

Query: 21  TLRGVDLNLLTVFDAVMQEQNITRAAHNLGMSQPAVSNAVARLKVMFNDELFMRQGRGIQ 80
           T + +DLNLL VF  V + ++ T+AA  L ++Q +VSNA++R +    + LF R GRGI+
Sbjct: 3   TQKPLDLNLLRVFMVVYRTRSFTQAAQELDLTQSSVSNAISRFRAWVGESLFTRVGRGIE 62

Query: 81  PTQRARQLFGPIRQALQLIRNELPS-SVFTPETSTRLFKLAICSPCDLRFAPQIMASIDE 139
           PT  AR+++    Q +  I   L     F P +S R F +             + A + +
Sbjct: 63  PTAVAREMYRKFEQPMADIETVLLGFEHFDPHSSQRRFYVYANESVIETLQAGVQALLQD 122

Query: 140 LAPSVQLHLDAEFDRQIAERMRYQEIDFVIDYARFDDQGFSSTEIFQDELVVVASKLHPH 199
               V        + ++   +  + +   ID         SS  +F + LV + S+ HP 
Sbjct: 123 ADIEVIFRESPPQEAELYRDILLERVAVAIDIKPAQQSLLSSKLLFTENLVCIVSRQHPR 182

Query: 200 IQGSITAEQLSAEKHAKLSKVHGQRSFSELAYRDF--DCQSYYEGTSLSNVLYVVGQSEL 257
           IQG I  EQ   EKH  L+      +  +L         + Y E +SL ++   VG+SE 
Sbjct: 183 IQGVINHEQYFEEKHVFLNLRRFNLTAGDLFTEGVLPRRRMYSEQSSLLSMFATVGKSEA 242

Query: 258 VTVAPRWMAENAANRDELQILAFPFAESKISGYLSWHESSEKDKGHIWLRDQLM 311
           + +AP   A   A+   LQIL  P     I  Y+ W     ++  H WLR  L+
Sbjct: 243 IGIAPLRYASQYADIFGLQILPMPLKTRPIDLYMVWSSKYTQNPSHQWLRSLLL 296