Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., long-chain-fatty-acid CoA ligase from Synechococcus elongatus PCC 7942

 Score =  221 bits (563), Expect = 7e-62
 Identities = 160/598 (26%), Positives = 284/598 (47%), Gaps = 44/598 (7%)

Query: 36  INWHQFGEQLDELSMALLAQGIGVQD------KIAIFSNNMPRWTIADFAALQIRAVTVP 89
           +++ +   Q+   +  LLA G+          ++A F++N PRW IAD   L   A    
Sbjct: 60  LSYQELAIQIQAFAAGLLALGVPTSTADDFPPRLAQFADNSPRWLIADQGTLLAGAANAV 119

Query: 90  IYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASC 149
                   +  Y+L+++   +  + E A     L        L+ ++ ++  +    +  
Sbjct: 120 RGAQAEVSELLYVLEDSG-SIGLIVEDAALLKKLQPGLASLSLQFVIVLSDEVVEIDSLR 178

Query: 150 AMHWDEFVAQSHHQDRAPLDALIEQANYDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEG 209
            + + + V +      AP   L      D L TLIYTSGTTG PKGVML + N+  Q+  
Sbjct: 179 VVGFSD-VLEMGRSLPAPEPIL----QLDRLATLIYTSGTTGPPKGVMLSHGNLLHQVTT 233

Query: 210 HDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLYKGATNCYLQDVAHVREALAEVRPTVMC 269
               +     D  L  LP  H +ERA   ++L +G T  Y   + +V++ + + RP  M 
Sbjct: 234 LGVVVQPQPGDTVLSILPTWHSYERACEYFLLSQGCTQVYTT-LRNVKQDIRQYRPQFMV 292

Query: 270 AVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQ---------QRQPSWM 320
           +V R +E I+  + ++  + P  ++ L      +  +  + R++          + P+  
Sbjct: 293 SVLRLWESIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLLALNQSPAQR 352

Query: 321 LKQS---------HQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKL 371
           L +          H+  D+LV  K+R   GGRI  +  GG  L   +  FF  +G+++ +
Sbjct: 353 LAEGVRMLALAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLV 412

Query: 372 GYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKI-----------GENNEILVRGPMVM 420
           GYG+TET+  ++          S G  +PG  ++I           G+   +L +GP +M
Sbjct: 413 GYGLTETSPVLTGRRPWHNLRGSAGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIM 472

Query: 421 RGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGA 480
           +GY+   + T ++ D +G+  TGD G+I   GNL +T R K+ +  + G+ I PQ IE A
Sbjct: 473 QGYFNKPEATAKAIDAEGWFDTGDLGYIVGEGNLVLTGRAKDTIVLTNGENIEPQPIEDA 532

Query: 481 IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEK 540
             +  +I QI ++   RK + ALIVP  +++  +A E  I   D L+ +    + E   +
Sbjct: 533 CLRSSYISQIMLVGQDRKSLGALIVPNQEAIALWASEQGISQTD-LQGVVQKLIREELNR 591

Query: 541 RVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQDS 598
            V + +      +++  FRL+ + FSM++G+LT T K+RR V+ + Y   I+ M++ +
Sbjct: 592 EVRD-RPGYRIDDRIGPFRLIEEPFSMENGQLTQTLKIRRNVVAEHYAAMIDGMFESA 648