Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  194 bits (494), Expect = 7e-54
 Identities = 160/589 (27%), Positives = 269/589 (45%), Gaps = 31/589 (5%)

Query: 24  ALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQI 83
           AL+ K  G W+ + W ++G  +   ++ L   G+     IA+   N P W   + AA  +
Sbjct: 37  ALREKDLGIWKEVTWAEYGLMVRLYALGLKDLGVERGQVIALLGANRPEWLWGEIAAHAL 96

Query: 84  RAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANID 143
              ++ IY     ++A Y+L ++    V   ++ Q D  L+   + P LR IV  +    
Sbjct: 97  GCASLGIYKDVLDDEADYLLAHSGAVAVIAEDEEQVDKLLTLAARVPSLRHIVYCDPRGL 156

Query: 144 LKQASCAM-HWDEFVAQSHHQD-RAP--LDALIEQANYDDLFTLIYTSGTTGTPKGVMLD 199
            K +   +   D+  A+    D R P   +  +   + DD+  L  TSGTT  PK  ML 
Sbjct: 157 RKYSDPRLISQDDLKARGRALDARDPGLYEREVAAGHGDDVAVLCTTSGTTARPKLAMLQ 216

Query: 200 YRNIGAQLEGHDQRLNLTQE---DVSLCFLPLSHVFERAWTA--YVLYKGATNCYLQDVA 254
               GA L      L        D  +  LPL  + E+ +     ++ +G  N ++++ A
Sbjct: 217 ---AGAFLRHCLDYLEADPRHPGDDYVSVLPLPWIMEQVYAVGQALIARGIVN-FVEEEA 272

Query: 255 HVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQ 314
                L E+ P  +   PR +E I + +  +++ A   ++ +F   + +G K A+ R ++
Sbjct: 273 TTMADLREIGPRFVLLAPRVWEGIAADVRARMMDASPFKRAMFEIGMGLG-KRALARNRR 331

Query: 315 RQPSWMLKQSHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGRFFHAIGINVKLGY 373
              SW+       A+ L+   LR  LG   +     GGA +      FFHA+G+ +K  Y
Sbjct: 332 ---SWL-------AEALLFRALRDRLGFSFLTSAATGGAAMGPETFSFFHAMGVPLKQLY 381

Query: 374 GMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENN-----EILVRGPMVMRGYYKLDK 428
           G TE             +P+++GL    + V+I   +     EIL R   +  GY+    
Sbjct: 382 GQTELAGAYVIHRAGDIDPETVGLPFAKSAVRIDNPDAEGVGEILGRDQGLFAGYFGAGD 441

Query: 429 ETTESFDEQGFLKTGDAGHID-ENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFI 487
            T       G+L TGDAG +  ENG+L + DR+K+L   S G   +PQ IE  +    FI
Sbjct: 442 ATAIDDLRDGWLHTGDAGFLKKENGHLVVIDRVKDLAVMSNGVRFSPQFIENKLKFSAFI 501

Query: 488 EQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQK 547
            +  ++   R +++A+I   +  L ++A++  I +     L    +V  +    V  +  
Sbjct: 502 AEAVILGRDRPYLAAIICIRWSILAKWAEQRAISFTGYSSLAARPEVYALLRAEVERVNA 561

Query: 548 ELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMYQ 596
            L   ++V+KF LL K    D GELT T+K+RR V+ ++Y  EI  +YQ
Sbjct: 562 SLPAAQRVRKFLLLYKELDPDDGELTRTRKVRRGVVAEKYAKEITALYQ 610