Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  117 bits (293), Expect = 1e-30
 Identities = 137/525 (26%), Positives = 209/525 (39%), Gaps = 120/525 (22%)

Query: 16  IAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTI 75
           IA+  DN A+      +W    + + GEQ+D       + G+    ++ +   N P + I
Sbjct: 33  IARFPDNPAIDFLGR-KW---TYRELGEQIDRACAGFQSLGVEPGTRVGLCLPNTPYYII 88

Query: 76  ADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQF---------DAALSQF 126
             +  L+   + V   P     +   +++++   ++   +  Q          D AL + 
Sbjct: 89  CYYGVLKAGGIVVNFNPLYVERELRELVEDSGTTLMVTLDLRQIYPKVAALLGDTALERI 148

Query: 127 EQCPELRLIVAMNANID--LKQASCAMHWDEFVAQSHHQDRAPLDAL--------IEQAN 176
             C    ++ ++ + +   LK++  A    +      H   A L A         I+ A 
Sbjct: 149 VVCSMSAILPSVKSLLFSVLKRSELA----DVPTDRRHIGFAKLIATKTPPRPVAIDPAT 204

Query: 177 YDDLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQ-----------EDVSLCF 225
              +  L YT GTTG PKG ML + N+           NLTQ           E+  L  
Sbjct: 205 A--VAVLQYTGGTTGLPKGAMLTHANVTG---------NLTQILGWFPEARWGEEKMLAV 253

Query: 226 LPLSHVFERAWTAYV-LYKGATNCYLQ--DVAHVREALAEVRPTVMCAVPRFYEKIFSAI 282
           LP  HVF       V L  GA    L   D+  V + +A  +PT+   VP  Y  I  A 
Sbjct: 254 LPFFHVFAMTVAMNVALALGAELILLPRFDLETVLKTIARKKPTLFPGVPTIYSAIIGA- 312

Query: 283 HEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLGG 342
              V K P                                          LS LR  L G
Sbjct: 313 ---VAKTPYD----------------------------------------LSSLRFCLSG 329

Query: 343 RINFMPCGGAKLD-ETIGRFFHAIGINVKLGYGMTETTATVSCWD-DHCFNPDSIGLSMP 400
                   GA L  E   RF    G  +  GYG++E +  V C   D    P SIG  +P
Sbjct: 330 --------GAPLPIEVKTRFEELTGCTLIEGYGLSEASPVVCCNPLDGAIKPGSIGQPLP 381

Query: 401 GAQVKI------------GENNEILVRGPMVMRGYYKLDKETTESFDEQGFLKTGDAGHI 448
           G  V+I            GE  EI VRGP VM GY++  ++T ++F + G L+TGD G+I
Sbjct: 382 GTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRPQDTEDTFID-GALRTGDIGYI 440

Query: 449 DENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVI 493
           D+ G +F+ DRIK+++   GG  + P++IE A+ +   + +  VI
Sbjct: 441 DDEGYVFLVDRIKDVI-LCGGYNVYPRIIEEALYQHEAVAEAVVI 484