Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., putative long-chain-fatty-acid--CoA ligase from Phaeobacter inhibens DSM 17395

 Score =  241 bits (616), Expect = 5e-68
 Identities = 172/605 (28%), Positives = 285/605 (47%), Gaps = 24/605 (3%)

Query: 12  IRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMP 71
           + +  AQ GD  A + K+ G WQ   W +  ++++ L++ L+  G+   D IAI   N P
Sbjct: 8   LERNAAQIGDRQAYREKEFGIWQCWTWSETQKEIEALALGLINLGVNEGDFIAIIGRNRP 67

Query: 72  RWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPE 131
               A  AA  + AV VP+Y     E+ AY+L +   + V  G+Q Q D  +   E+   
Sbjct: 68  SLYWAMVAAQSVGAVPVPLYQDAVAEEMAYVLGHCGARFVIAGDQEQVDKVIEVQEELSN 127

Query: 132 LRLIVAMNANIDLKQASCAMHWDEFVAQSHHQDRA---------PLDALIEQANYDDLFT 182
           L  I+ ++     K    A+H       +H QD+           L+A   +  YD    
Sbjct: 128 LEQIIYLDPRGMRKYDHHALH-----EYAHVQDQGRAARDEWTPDLEARKAKLTYDSTCV 182

Query: 183 LIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYVLY 242
           ++YTSGTTG PKGV+L  RN+    +   +   LT  +  L +LP++ V +  ++    Y
Sbjct: 183 MLYTSGTTGKPKGVVLSNRNVIESAKNSAEFDKLTAGENILSYLPMAWVGDFIFSVGQAY 242

Query: 243 --KGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWA 300
                 NC  +    +   L E+ PT   A PR +E   +++  ++  A  +++ +F   
Sbjct: 243 WCGFCVNC-PESADTMMTDLREIGPTYFFAPPRVFEGQLTSVMIRMEDASTLKRKMFHHF 301

Query: 301 VNMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIG 359
           +    K+       R    M +  ++  D LV   L+  LG GRI      G  +   I 
Sbjct: 302 LAHAKKVGGDILDGRPVGLMDRLKYKLGDLLVYGPLKDTLGYGRIRVGYTAGEAIGPEIF 361

Query: 360 RFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMV 419
            F+ ++ IN+K  YG TE T  ++   D     D++G+  P  ++KI +N EI  R P  
Sbjct: 362 DFYRSLAINLKQLYGQTEATVFITVQPDGEVRADTVGVPAPDVEIKIADNGEIFYRSPGT 421

Query: 420 MRGYYKLDKETTESFDEQGFLKTGDAGHIDE-NGNLFITDRIKELMKTSGGKYIAPQVIE 478
              YY   + T  + D +G++ TGDAG  +E +G+L I DR K++ K + G   AP+ +E
Sbjct: 422 FVEYYNNPESTASTKDAEGWVATGDAGFFEEDSGHLRIIDRAKDVGKMADGAMFAPKYVE 481

Query: 479 GAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMF 538
             +     I ++ +  + R    A I     ++  +A+  NI Y    EL  H +VL+  
Sbjct: 482 NKLKFYPDILEVVLFGNGRDRCVAFINIDLTAVGNWAERNNIAYASYQELAGHPKVLQSI 541

Query: 539 EKRVNELQKELAKFE-----QVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEE 593
            + V  + + +A+       QV +F +L K    D GE+T T+K+RR ++ D+Y D I  
Sbjct: 542 REHVETVNESVAQDVMLSGCQVHRFVVLHKELDADDGEMTRTRKVRRVIVEDKYSDIITA 601

Query: 594 MYQDS 598
           +Y  S
Sbjct: 602 LYDGS 606