Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., putative long-chain-fatty-acid-CoA ligase from Phaeobacter inhibens DSM 17395

 Score =  293 bits (749), Expect = 2e-83
 Identities = 179/595 (30%), Positives = 308/595 (51%), Gaps = 8/595 (1%)

Query: 8   IVKRIRQRIAQGGDNAALKHKQNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIAIFS 67
           + K    R    G   A + K  G W+A +W  + +  +++ + L+A G+   + ++I S
Sbjct: 52  VAKLFALRCRTLGPRTAHREKDMGIWKAYSWQDYWDHAEKIGLGLMALGLERGEVVSILS 111

Query: 68  NNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALSQFE 127
            +   W   D       A+   +Y T++ +Q AY++ ++  + + V    Q D  L    
Sbjct: 112 EDRKEWLYLDMGIQGAGAIASGVYTTDSAQQLAYLVNDSGSRFLVVENDEQLDKFLEIEA 171

Query: 128 QCPELRLIVAMNAN--IDLKQASCAMH---WDEFVAQSHHQDRAPLDALIEQANYDDLFT 182
           + P LR ++ ++ +   DL+   C      +D+  A       A  DA + ++  DD   
Sbjct: 172 EVPHLRWVIILDRDGLHDLRHEKCLFLDQLYDQGAAYKIANPTAFEDA-VGRSRPDDTAL 230

Query: 183 LIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-L 241
           LIYTSGTTG PKG ML + NI A +E   + L     D  LCFLPL H+ ER  + Y+ +
Sbjct: 231 LIYTSGTTGLPKGAMLSHENILATMESGARSLECYATDEQLCFLPLCHILERNVSVYLPM 290

Query: 242 YKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAV 301
             G+T  + +    V + + EV P    AVPR +EK++S +     +A  + +  F  AV
Sbjct: 291 AAGSTVNFAESPETVFDNIQEVSPATFFAVPRVWEKVYSRVLVLAQEATWLGRWAFNRAV 350

Query: 302 NMGAKMAVCRQQQRQPSWMLKQSHQFADKLVLSKLRALLG-GRINFMPCGGAKLDETIGR 360
             GA  A      +     +   ++  D LVL  LR +LG  R+     G A +   + R
Sbjct: 351 AAGAARANYVLAAKPVPSGIALRYRIWDLLVLRNLRRMLGLDRLRRGGTGAAPISPELLR 410

Query: 361 FFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVRGPMVM 420
           ++ +IG+ +  GYGMTE     +        P ++G ++PG +++I  + EI + G    
Sbjct: 411 WYWSIGVPLIEGYGMTENAGLTAANRVLSHRPGTVGQAVPGVEIRIAPDGEIQLWGLNNF 470

Query: 421 RGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGA 480
           +GY+   ++T E++ E G+L+TGD G +D+ G L IT RIK+++ T+GGK I P  IE  
Sbjct: 471 QGYWNKPEKTAETYTEDGWLRTGDVGQLDDAGFLTITGRIKDIIITAGGKNITPAEIESR 530

Query: 481 IGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEK 540
           +   H+I    VI D RKF++ LI+   +++E++A++  I + D   L    QV+++   
Sbjct: 531 LKFSHYISDAVVIGDRRKFLTCLIMIDQENVEKFAQDRKIPFSDFASLCAAEQVVDLIRG 590

Query: 541 RVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
            V+ + ++ A+ EQ+K FRL+    + +  ELT T KL+R ++  ++++ I++MY
Sbjct: 591 EVDAVNRDFARVEQIKDFRLINVLLTAEDDELTATMKLKRGLVEKKHKNLIDQMY 645