Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  115 bits (288), Expect = 5e-30
 Identities = 136/547 (24%), Positives = 223/547 (40%), Gaps = 107/547 (19%)

Query: 38  WHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPE 97
           + +F E+ D L+  LL  GI   D I I++ N+P W    FA  +I  V V +       
Sbjct: 36  YKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATAKIGVVLVTVNTAYKSH 95

Query: 98  QAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASCAMHWDEF- 156
           + AY+++ +D+K +         A +  F     L ++  +   +   Q    ++ +EF 
Sbjct: 96  ELAYVMKQSDMKAL---------AIIDSFRDVNYLEILYELVPELKTSQRG-KLNSEEFP 145

Query: 157 -------VAQSHHQDRAPLDALIEQANY---------------DDLFTLIYTSGTTGTPK 194
                  V Q  H+       L+   NY               DD+  + YTSGTTG PK
Sbjct: 146 YLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGLDSDDVINMQYTSGTTGFPK 205

Query: 195 GVMLDYRNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERA-WTAYVLYKGATNCYLQ-- 251
           GVML ++NI        ++   T+E+     +PL H F        +L  G T   L+  
Sbjct: 206 GVMLTHKNILNNGYYIGEKQKFTEEERLCLPVPLFHCFGIVLGVLALLTHGGTLVMLEIF 265

Query: 252 DVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCR 311
           D   V  A+ + + T +  VP  +   F                                
Sbjct: 266 DPLLVLAAIQKEKCTAVYGVPTMFIAEF-------------------------------- 293

Query: 312 QQQRQPSWMLKQSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKL 371
                       SH   +   LS LR    G +    C    + + +   +      + +
Sbjct: 294 ------------SHPMFEMFDLSSLRT---GIMAGSTCPIEAMKKVMSDMYMR---EITI 335

Query: 372 GYGMTETTA--TVSCWDDHC-FNPDSIGLSMPGAQVKI-----------GENNEILVRGP 417
            YG+TE +   T++  DD      +S+G +MP  +VKI           G   EI  RG 
Sbjct: 336 SYGLTEASPVFTMTSVDDPFEKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGY 395

Query: 418 MVMRGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVI 477
            VM+GYYK+ ++T E  ++ G+L +GD    DE+G   I  RIK+++   GG+ I P+ I
Sbjct: 396 NVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDEDGYYKIVGRIKDMI-IRGGENIYPREI 454

Query: 478 EGAIGKDHFIE--QIAVIADTR--KFVSALIVP--CFDSLEEYAKELNIKYHDRLELIKH 531
           E  +     I   Q+  I D +  + V A ++P   ++  EE  ++  ++   R ++ KH
Sbjct: 455 EEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPKEGYEIKEEDVRDFALEKIARYKVPKH 514

Query: 532 SQVLEMF 538
             V+E F
Sbjct: 515 VFVVEEF 521