Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., AMP-binding enzyme family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  191 bits (484), Expect = 9e-53
 Identities = 153/564 (27%), Positives = 252/564 (44%), Gaps = 54/564 (9%)

Query: 34  QAINWHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPT 93
           + + +    +  + L++ L   G+G  D++A+ + N P W IA FA   + A+ VPI P 
Sbjct: 32  EPLTFRDLHDHAEHLALWLRDNGVGTGDRVALLAENSPNWGIAYFAITGMGAIAVPILPE 91

Query: 94  NTPEQAAYILQNADVKVVFVGEQAQFDAALSQFEQCPELRLIVAMNANIDLKQASCAMHW 153
              +   +IL++++ K VFV E+      L + E   +  + ++M     + Q +     
Sbjct: 92  FHADAVQHILRHSEAKAVFVSER--LFPKLEEGEGIADSLMCISMETFQSIAQGTTRDML 149

Query: 154 DEFVAQSHHQDRAPLDALIEQANY-------DDLFTLIYTSGTTGTPKGVMLDYRNIGAQ 206
            E  ++   + R   D     AN        DD+  +IYTSGTTG  KGV+L +RNI   
Sbjct: 150 RELKSKGLREFRKLRDKAKRLANMADAAPAEDDVAAIIYTSGTTGHSKGVVLTHRNIVWD 209

Query: 207 LEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-LYKGATNCYLQDVAHVRE---ALAE 262
            +     + L   D  L  LPLSH +E      + +  GA   Y+      R    A+A+
Sbjct: 210 ADAVKSIVKLGPGDRMLSILPLSHTYECTLGLVLPVLNGAHVHYMDKPPTARALLPAMAQ 269

Query: 263 VRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQPSWMLK 322
           VRPT M +VP   EKIF        K  L+ K+  +W           +Q+     ++ +
Sbjct: 270 VRPTAMLSVPLVIEKIF--------KTALLPKLTGSWL----------KQRLYAIPFVRR 311

Query: 323 QSHQFADKLVLSKLRALLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMTETTATV 382
           + H  A +    KL    GG +     GGA +   + RF         +GYG+TET   V
Sbjct: 312 KLHALAGR----KLLESFGGALRIFCIGGAGIAPDVERFLREANFPYAIGYGLTETAPLV 367

Query: 383 SCWDDHCFNPDSIGLSMPGAQVKIGE------NNEILVRGPMVMRGYYKLDKETTESFDE 436
           +          S G ++ G  + I          EI+VRGP VMR YYK  + T  +F  
Sbjct: 368 AGSGPASTRLTSTGFTLDGVDIAIDAPDPATGEGEIIVRGPNVMREYYKAPQITASAFTP 427

Query: 437 QGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIGKDHFIEQIAVIADT 496
           +G+ +TGD G  D +G L+I  R+K ++    G+ I P+ +E  I +  F+ +  V    
Sbjct: 428 EGWFRTGDLGKFDADGYLYIKGRLKNVIIGPSGENIYPEEVEAIIHQSPFVLESLVFQQD 487

Query: 497 RKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVLEMFEKRVNELQKELAKFEQVK 556
            + V+ + +         A  L+  + D   L +  ++  + E   NE+  +++ F ++ 
Sbjct: 488 GRLVARIHLD--------AARLDESFGDLPALKQREKIDALLETLRNEVNTKVSTFARLA 539

Query: 557 KFRLLPKAFSMDSGELTPTQKLRR 580
           K     + F     E TPT K++R
Sbjct: 540 KVIEQTEPF-----EKTPTHKIKR 558