Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., AMP-binding enzyme family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  111 bits (278), Expect = 7e-29
 Identities = 120/508 (23%), Positives = 218/508 (42%), Gaps = 95/508 (18%)

Query: 38  WHQFGEQLDELSMALLAQGIGVQDKIAIFSNNMPRWTIADFAALQIRAVTVPIYPTNTPE 97
           + +F   +D+L+  L+A G+   DK+A+++ N+P W    FA  +I AV + +       
Sbjct: 39  YREFVSVVDDLARGLMALGVKRGDKVALWATNVPYWVALQFATAKIGAVLLTVNTNYRES 98

Query: 98  QAAYILQNADVKVVFVGEQAQ-FDAALSQFEQCPELRLIVAMNANID-LKQASCAMHWDE 155
           +  Y+L+ ++ + +F+ +  +  D   + ++  PELR+        + L      M    
Sbjct: 99  ELRYLLEQSECENLFIMDGFRDHDFVQTIYQVIPELRMQPRGQLRCEGLPHLKRVM---- 154

Query: 156 FVAQSHHQDRAPLDALI---------------EQANYDDLFTLIYTSGTTGTPKGVMLDY 200
           F+    H+    +  ++               ++ +  D+  + YTSGTTG PKGVML +
Sbjct: 155 FLGAEKHRGMYSVPEIVSLGVMVSDEEFRQRQDELDPYDVVNMQYTSGTTGFPKGVMLTH 214

Query: 201 RNIGAQLEGHDQRLNLTQEDVSLCFLPLSHVFERAWTAYV-LYKGATNCYLQDV--AHVR 257
             IG       +    T++D     +PL H F         +  GA    L++    HV 
Sbjct: 215 VGIGNNGYWIGRNQGFTEKDRVCLPVPLFHCFGCVLGVMAAINHGAALVILENFNPMHVM 274

Query: 258 EALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLFTWAVNMGAKMAVCRQQQRQP 317
            ++ + + T +  VP     +F A+ E                                 
Sbjct: 275 ASVDQEKCTALYGVPT----MFLAVLE--------------------------------- 297

Query: 318 SWMLKQSHQFADKLVLSKLRA-LLGGRINFMPCGGAKLDETIGRFFHAIGINVKLGYGMT 376
                  H+  D+   S LR  ++ G +   P     +++   R        + + YG+T
Sbjct: 298 -------HKLFDRFDFSSLRTGIMAGSVCPEPLMRRVIEKMNMR-------EITICYGLT 343

Query: 377 ETTA--TVSCWDDHCFNP-DSIGLSMPGAQVKI-----------GENNEILVRGPMVMRG 422
           E +   T +  DD       ++G +MPG +V+I           G   E++ RG  VM+G
Sbjct: 344 EGSPVMTQTLVDDSLERRVQTVGRAMPGIEVRIVDPETNEEVPHGTPGEVVCRGYNVMKG 403

Query: 423 YYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQVIEGAIG 482
           YY + + T ++ D  G+L +GD G +DE+G + IT RIK+++   GG+ I P+ IE  + 
Sbjct: 404 YYNMPEATAKAVDGDGWLHSGDLGIMDEHGYVRITGRIKDMI-IRGGENIYPREIEEFLY 462

Query: 483 KDHFIEQIAVI-ADTRKF---VSALIVP 506
               ++ + V+   +RK+   V A I+P
Sbjct: 463 GMEGVQDVQVVGVPSRKYGEEVGAFIIP 490