Pairwise Alignments

Query, 601 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  481 bits (1237), Expect = e-140
 Identities = 249/602 (41%), Positives = 390/602 (64%), Gaps = 16/602 (2%)

Query: 7   HIVKRIRQRIAQGGDNAALKHK--QNGQWQAINWHQFGEQLDELSMALLAQGIGVQDKIA 64
           H+   + ++  + GD  AL+++  +  QW  I W+QF   + + + A +A G+  Q+ I 
Sbjct: 5   HLSVLVHRQAEKYGDRVALRYRDYETAQWIPITWNQFSGTVRQAANAFVALGVEEQENIG 64

Query: 65  IFSNNMPRWTIADFAALQIRAVTVPIYPTNTPEQAAYILQNADVKVVFVGEQAQFDAALS 124
           IFS N P W   DF A   R VT+P Y T++P QA YI+ +A ++ +FVGEQ Q+D+A S
Sbjct: 65  IFSQNKPEWFYVDFGAFANRGVTIPFYATSSPAQAQYIINDAQIRYLFVGEQYQYDSAFS 124

Query: 125 QFEQCPELRLIVAMNANI--DLKQASCAMHWDEFVAQSHHQDRAPLDALIEQ----ANYD 178
            F  C  L+ ++  + ++  D +  S ++++DEF+A     +  P + ++E+    A+YD
Sbjct: 125 IFGFCSSLQQLIIFDRSVVKDPRDVS-SIYFDEFMAMG---EGLPHNEVVEERTARASYD 180

Query: 179 DLFTLIYTSGTTGTPKGVMLDYRNIGAQLEGHDQRLN-LTQEDVSLCFLPLSHVFERAWT 237
           DL  ++YTSGTTG PKGVML +     Q   HD+RL  +T +DVS+ FLPL+HVFE+AW 
Sbjct: 181 DLANILYTSGTTGEPKGVMLHHSCYLEQFHTHDERLTTMTDKDVSMNFLPLTHVFEKAWC 240

Query: 238 AYVLYKGATNCYLQDVAHVREALAEVRPTVMCAVPRFYEKIFSAIHEKVVKAPLVRKVLF 297
              ++KG   C     A ++  + E+RPT+MC+VPRF+EK+++ + EK+ +   ++K L 
Sbjct: 241 YLCIHKGVQICINLRPADIQTTIKEIRPTLMCSVPRFWEKVYAGVQEKINETTGLKKALM 300

Query: 298 TWAVNMGAKMAV-CRQQQRQPSWMLKQSHQFADKLVLSKLRALLG-GRINFMPCGGAKLD 355
             A+ +G    +   +  + P  M +  ++F +K + S L+  +G    NF P  GA + 
Sbjct: 301 LDAIKVGRIHNLDYLRLGKTPPVMNQLKYKFYEKTIYSLLKKTIGIENGNFFPTAGAAVP 360

Query: 356 ETIGRFFHAIGINVKLGYGMTETTATVSCWDDHCFNPDSIGLSMPGAQVKIGENNEILVR 415
           + I  F H++GIN+ +GYG+TE+TATVSC     ++  S+G+ +PG +VKIGE+NEIL+R
Sbjct: 361 DEINEFVHSVGINMVVGYGLTESTATVSCTLPVGYDIGSVGVVLPGLEVKIGEDNEILLR 420

Query: 416 GPMVMRGYYKLDKETTESFDEQGFLKTGDAGHIDENGNLFITDRIKELMKTSGGKYIAPQ 475
           G  + +GYYK  + T  + D  G+  TGDAG+  +NG LF+T+RIK+L KTS GKYIAPQ
Sbjct: 421 GKSITKGYYKKAEATAAAIDADGWFHTGDAGYF-KNGQLFLTERIKDLFKTSNGKYIAPQ 479

Query: 476 VIEGAIGKDHFIEQIAVIADTRKFVSALIVPCFDSLEEYAKELNIKYHDRLELIKHSQVL 535
            +E  +  D +I+QIA+IAD RKFVSALIVP +  +++YAKE  I+Y D  EL++H +++
Sbjct: 480 ALETKLVIDRYIDQIAIIADQRKFVSALIVPVYGFVKDYAKEKGIEYKDMAELLQHPKIV 539

Query: 536 EMFEKRVNELQKELAKFEQVKKFRLLPKAFSMDSGELTPTQKLRRKVINDRYQDEIEEMY 595
            +F  R+  LQ++ A +EQ+K+F LLP+ FSM+ GELT T KL+R V+++ Y++ IE+MY
Sbjct: 540 GLFRARIETLQQQFAHYEQIKRFTLLPEPFSMERGELTNTLKLKRSVVSENYKELIEKMY 599

Query: 596 QD 597
           ++
Sbjct: 600 EE 601