Pairwise Alignments

Query, 402 a.a., 2-octaprenyl-6-methoxyphenyl hydroxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (372), Expect = 4e-40
 Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 8/397 (2%)

Query: 8   NISKPISFDVIIAGGAMAGATLALALQHLSQGKLKVAVIEAFATD-HSAHPGFDARSIAL 66
           N  K +  DV++ GG M GA  AL L  L    L VAV+EA+    + +    D R  A+
Sbjct: 4   NQRKTLVKDVVVLGGGMVGAATALGLAQLG---LSVAVVEAYGPKAYDSEQELDLRVSAI 60

Query: 67  SYGTVQILQELQLWPSLQPFATAIKHIHVSDQSHAGMTDIHCETLGVSALGYVVELADVG 126
           S  + Q+L+ L    +L            + +    +T  H + +G S LG++VE   V 
Sbjct: 61  SVASEQLLERLGALSALGEMRQVAYKGLETWEMEGCITQFHSDQIGASHLGHIVENRLVQ 120

Query: 127 RVYAERMAQCSAIQQFVPSRVVNITREQESVTVQLNTKETLQGKLLVAADGALSTCCQAL 186
               ++  +   +    P++V    R ++ + + L     ++ +LLV ADGA S   Q  
Sbjct: 121 LALWQQFDRHDNLSLLCPAKVSQFARMEDGIRLTLEDGSEIETRLLVGADGANSQVRQWA 180

Query: 187 GLAMQEHDFEQVALIANITSAQPHAGRAFERFTPHGPVALLPMSQDRLSLVWCLPPEQVA 246
           G+ +   D+ Q A++ NI + Q      +++FTP GP +LLP+     SLVW     ++A
Sbjct: 181 GIGVTGWDYAQSAMLINIATEQEEQDVTWQQFTPKGPRSLLPLPGKHASLVWYDDASRIA 240

Query: 247 HWLHCSEAEFLQGLQQAFGWRLGALTHAGERSVYPLVLRYREQTVSHRFAIVGNAAQTLH 306
                S     + +   F  RL        +  + L  R+ ++       I+G+AA T++
Sbjct: 241 QLQSLSNQALYEQIDAHFPKRLEREFKVLSKGSFKLTRRHAQRYFDDHLVILGDAAHTIN 300

Query: 307 PIAGQGFNLGIRDVA----TLAEEITRSDDAGEYALLQRYFQRRQADRTATISLTTGLVH 362
           P+AGQG NLG +DV+    T A+ I       +  +L+ Y  +R  D    ++       
Sbjct: 301 PLAGQGVNLGFKDVSALIDTFADAIANHKCWWDNEVLKSYQAKRYTDNQLMMTTMDLFYA 360

Query: 363 TFSNDWLAMRMGRNLGLMAMDNLPLLKAPLLRRTLGI 399
            FSN+ L +++ RN  L   +    +K  +L+  +G+
Sbjct: 361 GFSNELLPLKLLRNGALKLANIDGPIKQKVLKYAMGL 397