Pairwise Alignments

Query, 323 a.a., tRNA-modifying protein YgfZ from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., glycine cleavage T protein (aminomethyl transferase) (RefSeq) from Shewanella loihica PV-4

 Score =  211 bits (537), Expect = 2e-59
 Identities = 119/309 (38%), Positives = 179/309 (57%), Gaps = 7/309 (2%)

Query: 19  PELMLTHLTGWGAITLVGADKKAYLQGQVTCNVVSLQEQQVTFGAHCDAKGKVWSVFRLF 78
           P ++ + L+  G I++ G   + ++ GQVT ++ SL+  Q  +GAHCD KGK+ + FR F
Sbjct: 17  PAIVFSQLSHLGLISVTGEQARTFIHGQVTTDITSLEADQWRWGAHCDPKGKMLASFRTF 76

Query: 79  HHHDGYAMFQPQSAMEVELRELKKYAIFSKVTIAESSD--IALGVMGSQADAWI-DTVSE 135
            H D   M  P+  + ++L +L+KYA+FSK  + ++SD     GV G QA AWI     E
Sbjct: 77  AHQDALLMMMPRETLALDLPQLQKYAVFSKAELVDASDDWCLFGVSGEQALAWIAQAFGE 136

Query: 136 TTGDVRRIAGGTAVRMSPQRWLLLVNAE-QAEQYVNAWQGLHVEQSLWTRMDIEEAVPVV 194
              ++  I GG  +R   +R+++ V  + QAE      Q ++ + S W  ++I   +P +
Sbjct: 137 IAAELTEIPGGVILR-DGERYIIAVKCDTQAELLAKIDQPIY-DFSAWQAIEIAAGLPNL 194

Query: 195 TQTAQNEHIPQALNVQAVDGISFTKGCYTGQETVARAKYRGINKRAMYIVKGNLSAPLSQ 254
               Q++ +PQ  NVQAVDGISFTKGCY GQETVAR KYRG NKRA+YIV+G+ S  +  
Sbjct: 195 YARHQSQFVPQMCNVQAVDGISFTKGCYMGQETVARMKYRGGNKRALYIVQGSASVTIDD 254

Query: 255 DEPVVLERAVGENWRSAGALLTHYRFTDSIAIGLIVLPNDLEHDVKLRLAAQPDTRWHIQ 314
           D  + ++    E +R AG +L   +    + +   VLPND     +LR+A    +   + 
Sbjct: 255 DSQLEMKLEDDEGYRRAGTILEAVQRDGQLLLS-AVLPNDTPLTAQLRVAGDEASVLTLA 313

Query: 315 PLPYSLSDE 323
           PLPYSL +E
Sbjct: 314 PLPYSLDEE 322