Pairwise Alignments

Query, 550 a.a., L-aspartate oxidase from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., succinate dehydrogenase flavoprotein subunit (RefSeq) from Shewanella loihica PV-4

 Score =  209 bits (532), Expect = 2e-58
 Identities = 166/556 (29%), Positives = 257/556 (46%), Gaps = 65/556 (11%)

Query: 25  DVLVIGSGAAGLSLALQVAQYGK-VIVLSKGPRSEGATFYAQGGIAAVFDES--DSIESH 81
           D +VIG+G AG+  ALQ+++ GK   +LSK   +   T  AQGGI      +  D  E H
Sbjct: 9   DAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNAHEDHWEQH 68

Query: 82  VQDTLIAGAGICDEQTVRFIAEHAKECVQWLIDGGVPFDKEEDSDNDHPRY--HLTREGG 139
           + DT+     I D+  + F+ +   E +  L   G+PF + ++       +       GG
Sbjct: 69  MYDTVKGSDFIGDQDAIEFMCQTGPEAIIELEHMGLPFSRFDNGKIYQRPFGGQSKNFGG 128

Query: 140 HSHRRILHAADATGMAMQTSLQDNAHNHPNITVLERHNALDLITEDKIGGDANKVVGAYV 199
               R   AAD TG A+   L      H    V     ALDL+  +        +VG   
Sbjct: 129 EQAARTAAAADRTGHALLHCLYQQNVKHKT-EVFSEWYALDLVKNED-----GAIVGCTA 182

Query: 200 WNRNAEHVETIRAKFVVLATGGASKVYQYTSNPDVSSGDGIAMAWRAGCRVANLEFNQFH 259
                  +   ++K  +LATGGA ++Y  T+N  +++GDG+ MA RAG ++ ++E  QFH
Sbjct: 183 IEIETGEIVYFKSKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQFH 242

Query: 260 PTCLYHPEARNFLLTEALRGEGAYLRRPDGSRFMPDFDERA-ELAPRDIVARAIDFEMKR 318
           PT +        L+TE  RGEG YL   DG RFM  +   A +LA RD+VAR++  E++ 
Sbjct: 243 PTGI---AGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIRE 299

Query: 319 -------LGADCMYLDISHKPADFIEKHFPTIYSRLMDLG-IDMTKEPIPIVPAAHYTCG 370
                  LG  C+ L + H   + +E   P +         ID    PIP++P  HY  G
Sbjct: 300 GRGLDGPLGPHCL-LKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMG 358

Query: 371 GVMVNPQGQ----------TDLKQLYAIGEVSYTGLHGANRMASNSLLECVVYAWSASQD 420
           G+     GQ          +D+  L+A+GE++   +HGANR+  NSLL+ VV+  +A Q 
Sbjct: 359 GLPAKVSGQVIRKNEDGSESDVVGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQH 418

Query: 421 IIAQLPNASMP------------ESLPAWDESQVTCSDEEVVLQHNWHELRLFMWDYMGI 468
           +   L   + P            E L  W+ ++    D E   Q    +L+L M     +
Sbjct: 419 LGKALDETADPKEASADEIAKSLERLNRWESNK----DGEDPAQIR-KDLQLCMQLNFSV 473

Query: 469 VRTNKRLERAMRRIQLLQQETHEYYSNFRVSNN----------LLEMRNLLQVAELMVRC 518
            RT + +   +  ++ ++    E  +N ++S+N           LE+ NL+  A      
Sbjct: 474 FRTGEAMAEGLEELKAIR----ERLANAKLSDNSREFNTQRIECLELDNLMATAIATAYA 529

Query: 519 AMQRKESRGLHYTLDY 534
           A  R+ESRG H   D+
Sbjct: 530 ANFRQESRGAHSREDF 545