Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 184 a.a., Sigma-70 region 2:Sigma-70 region 4 from Pseudomonas syringae pv. syringae B728a

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 50/154 (32%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 37  ISRYVSNSGDVADVAQEAFIKAYRAIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRP-P 95
           I + V N+ DV D+ Q  F++A R    F+  S   TWL  IA+N  +NH     R+P  
Sbjct: 37  IQKRVKNADDVDDILQCVFLEALRNEHKFQHASKPQTWLCGIALNLIRNHFRKMYRQPYQ 96

Query: 96  ASDVDAEEAEFYEGGDALKELSNPENITLSKELKKTVFDAIDALPDDLKTAMTLR-ELDG 154
            S  D    +    GD   ++     +         V +AID LP +++  + +  E+DG
Sbjct: 97  ESWEDEVHTDLEWNGDITHQVDGHRQLA-------RVIEAIDCLPTNMQKVLEVSLEMDG 149

Query: 155 LSYEEIAEVMDCPVGTVRSRIFRAREAVEKKIKP 188
            +Y+E A  +  P+GTVRSR+ RAR  +++ I P
Sbjct: 150 -NYQETANTLGVPIGTVRSRLSRARVQLKQHIDP 182