Pairwise Alignments

Query, 190 a.a., RNA polymerase sigma factor RpoE from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., RNA polymerase sigma factor RpoE from Klebsiella michiganensis M5al

 Score =  281 bits (719), Expect = 5e-81
 Identities = 134/190 (70%), Positives = 171/190 (90%), Gaps = 1/190 (0%)

Query: 1   MNEQLTDQVLIERVQNGDKQAFNLLVLRYQNKVCNLISRYVSNSGDVADVAQEAFIKAYR 60
           M+EQLTDQVL+ERVQ GD++AFNLLV+RYQ+KV +L+SRYV   GD+ADV QE+F+KA+R
Sbjct: 1   MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVP-PGDIADVVQESFVKAWR 59

Query: 61  AIPTFRGESAFYTWLYRIAVNTAKNHIVAQSRRPPASDVDAEEAEFYEGGDALKELSNPE 120
           A+ +FRG+SAFYTWLYRIAVNTAKN++VAQ RRPP+SDVDA +AE +E G ALKE+SNPE
Sbjct: 60  ALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENFESGGALKEISNPE 119

Query: 121 NITLSKELKKTVFDAIDALPDDLKTAMTLRELDGLSYEEIAEVMDCPVGTVRSRIFRARE 180
           N+ LS+EL++ VF  I++LP+DL+ A+TLRELDG+SYEEIA +MDCPVGTVRSRIFRARE
Sbjct: 120 NLMLSEELRQIVFRTIESLPEDLRMAITLRELDGMSYEEIAAIMDCPVGTVRSRIFRARE 179

Query: 181 AVEKKIKPLL 190
           A++ K++PL+
Sbjct: 180 AIDNKVQPLI 189