Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 198 a.a., sigma-E factor negative regulatory protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  111 bits (277), Expect = 1e-29
 Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 18/191 (9%)

Query: 10  KEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALA 69
           +E +SA +DGE  D + +  LA D D+   W+ YHL+GD +R E P     +++  +A A
Sbjct: 6   QEWVSASVDGET-DRQTLAELAADTDSHAKWQRYHLMGDAMRDELPQAMPLDLSARIAAA 64

Query: 70  LENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIFG 129
           LE+EP             +   ++E +     ++  +  ++ Q GQ GIAA V+L  + G
Sbjct: 65  LEDEPT------------ILAPKVEREATQAPSRAVVVPFMRQLGQYGIAAAVALMAVVG 112

Query: 130 VQQYGGQSSGVENELPVLQTIPLAGSAEPVSLTRDSV---EKHAPDSSMQEQRRRVNALL 186
           VQ Y  QS+  +  LPVL T PL G+A PVSL    V    +   +  + EQRRR+NA L
Sbjct: 113 VQNY--QSTQDDAPLPVLNTRPLVGTATPVSLQTGPVANQNQGNANDQLLEQRRRINAYL 170

Query: 187 QDYELQLRLNS 197
           QD+ LQ RLN+
Sbjct: 171 QDHMLQQRLNT 181