Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 200 a.a., anti sigma-E protein, RseA (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (290), Expect = 3e-31
 Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 20/197 (10%)

Query: 10  KEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALA 69
           +E +SA +DGE ID + +  LA D D+ + W++YH+IGD +RGE P     +++ ++A A
Sbjct: 6   QEWVSAAVDGE-IDEQELAQLAADTDSHEKWRDYHMIGDAMRGELPAAINLDLSANIAAA 64

Query: 70  LENEPAHNPLHHSTNVIDLQQARLEA-QPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIF 128
           +E EP+            L   R+E  +  PQ+    +     QFGQ  IAA V+L  + 
Sbjct: 65  IELEPS-----------ILVPKRVETPEVAPQRQLASVVPLFKQFGQYAIAASVALVAVI 113

Query: 129 GVQQYGGQSSGVEN-ELPVLQTIPLAGSAEPVSLTRDSVEKHA--PDSSMQEQRRRVNAL 185
           GVQ Y     GVE+  +PVL T PL GSA PVSL    V+++    +  + EQR R+N  
Sbjct: 114 GVQNY--NQGGVEDAPMPVLNTRPLIGSASPVSLQTGPVQQNQSYTNERVMEQRHRINTY 171

Query: 186 LQDYELQLRLNSENSAS 202
           +QD+ LQ RLN  NSA+
Sbjct: 172 IQDHMLQQRLN--NSAN 186