Pairwise Alignments

Query, 212 a.a., sigma-E factor negative regulatory protein RseA from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., sigma-E factor negative regulatory protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (292), Expect = 2e-31
 Identities = 75/196 (38%), Positives = 108/196 (55%), Gaps = 19/196 (9%)

Query: 10  KEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALA 69
           +E +SA +DGE  D + +  LA D  + + W+NYHLIGD +RGE P    ++++ S+A A
Sbjct: 6   QEWVSAAVDGET-DVQTMAELAADTHSHNKWRNYHLIGDAMRGELPQTMAFDLSASIAAA 64

Query: 70  LENEPAHNPLHHSTNVIDLQQARLEAQPKPQQA------KRQLPAWLSQFGQVGIAACVS 123
           ++ EPA         ++  Q    E    PQQ        R +P +  QFGQ  IAA V+
Sbjct: 65  IDLEPA---------IVSPQVTAPEVTTVPQQVAVNEGQSRVVPLF-KQFGQYAIAATVA 114

Query: 124 LAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVSLTRDSVEKHA--PDSSMQEQRRR 181
           +  I GVQ +   +    +  PVL T PL GSA PVSL    V+++    +  M EQRRR
Sbjct: 115 MFAIVGVQNFNQTADDATSPSPVLITRPLVGSASPVSLQTGPVQQNQSYTNDQMNEQRRR 174

Query: 182 VNALLQDYELQLRLNS 197
           +N  +QD+ LQ RLN+
Sbjct: 175 INTYIQDHMLQQRLNT 190