Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., Negative regulator of sigma E activity from Pseudomonas stutzeri RCH2

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 21/209 (10%)

Query: 117 DVAELSRYYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDG 176
           D   LS +Y+F ++G +R AG     L VVP+D  RY + + +D  + LPL++ +L+  G
Sbjct: 109 DPKALSEWYEFRQIGDSRVAGRPAVALAVVPRDQHRYGFELHLDRDTALPLKSLMLNEKG 168

Query: 177 EVLEQYRTISFSVSERLAEIMA--GLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAME 234
           ++LE+++   FS      E+ A  G   V + +     + +   + W+  W+P GF+ ++
Sbjct: 169 QLLERFQFTHFSTDIDTQELTASSGCKAVSISK-----REANLSSAWRSDWLPAGFKLLD 223

Query: 235 LNRYRMAMTERLVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLH---------S 285
            N+     +   V    Y DGL  FSV++       L+G LV   R  +          S
Sbjct: 224 ANQRPSPASSETVSWLSYGDGLAKFSVFLE-----PLRGALVEDARSQMGPTVAVSKRIS 278

Query: 286 VVKGENEISVVGDIPPATAQRIAQSVMFG 314
              G+  ++VVG+IP  TA+R+A S+  G
Sbjct: 279 TADGDVMVTVVGEIPLGTAERVALSMRTG 307