Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., sigma E regulatory protein, MucB/RseB from Pseudomonas syringae pv. syringae B728a

 Score =  107 bits (266), Expect = 5e-28
 Identities = 80/298 (26%), Positives = 139/298 (46%), Gaps = 15/298 (5%)

Query: 22  EEESAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQDDQQLAHLVYLSGPVRE 81
           + + A+  + ++ +  Q  +Y+ +++  +  S       H   D      L+ L G  +E
Sbjct: 20  QADDAQDAINRLAKVDQQQSYQGTFVYERNGSFSTHRIWHRIADGHIQERLLQLDGSAQE 79

Query: 82  VIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLNTDVAELSRYYDFVKVGRAREAGAACQ 141
           V+R       +       T+E+G            DV  LS +YD    G++R AG    
Sbjct: 80  VLRVDGFTQCVSG-----TLEAGVANPADSSARAFDVKRLSAWYDMKIAGKSRVAGRQAT 134

Query: 142 VLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYRTISFSVSERLAEIMAGLN 201
           ++ + PKD  RY   + +D ++ L L++ LL   G++LE+++      +  L+E M   +
Sbjct: 135 IVALSPKDQHRYGLELHLDNETGLVLKSLLLSEKGQLLERFQFTDLDTASVLSEQMLKTS 194

Query: 202 KVQLP-EVLKL-PKGSVQETFWQVTWVPDGFQAMELNRYRMAMTERLVESQMYSDGLFNF 259
               P  V+K  P+ S+    W   W+P GF        + A T+  V   MYSDGL  F
Sbjct: 195 ADCKPVSVVKTKPEASISPVAWHSDWLPPGFDVSSSGVRKDAATQSAVTHLMYSDGLARF 254

Query: 260 SVYV------SASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQRIAQSV 311
           SV++      ++SD  +  G  V   RR   +  +G+  ++VVG++P  TA+RIA S+
Sbjct: 255 SVFIESVKGGASSDIRTQLGPTVAVSRRL--TTPQGDMMVTVVGEVPMGTAERIALSM 310