Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., sigma E regulatory protein, MucB/RseB from Marinobacter adhaerens HP15

 Score = 99.4 bits (246), Expect = 1e-25
 Identities = 77/317 (24%), Positives = 142/317 (44%), Gaps = 16/317 (5%)

Query: 5   LISALTLFCVNSTTAFAEEESAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQ 64
           ++    L    S  A A+E+ A A L ++  A    +Y   ++  +  S+  +   H   
Sbjct: 1   MLVGFLLALAGSLPAAADEDEASAWLERLGPALNMTSYRGVFVYARGESVHSMQIAHRYN 60

Query: 65  DDQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLNTDVAELSRY 124
           D      LV   G   E++R+G  V  + P      ++      P      + +  +S +
Sbjct: 61  DGVVEERLVLQDGGSGEIVRKGMNVVCVLPETGRVKLDQVIPSGPFAEAFTSQLMPVSHW 120

Query: 125 YDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYRT 184
           Y     G  R AG     + +  KD  RYS+ +W+++ + L +++ + + +GEVLEQ++ 
Sbjct: 121 YRAEMKGEDRVAGYDVVSVALSAKDPYRYSHRLWLEKSTGLLVKSHVRNAEGEVLEQFQF 180

Query: 185 ISFSVSERL--AEIMAGLNKVQLPEVLKLPKGSV----QETFWQVTWVPDGFQAMELNRY 238
            S  + E +  +E        ++   L  P  +     +   WQ+ W P+GF      R 
Sbjct: 181 TSLHIGEDIPDSEFEIRTEGREISRTLDEPAATASVVQRMDGWQLGWRPEGFVPAAAPRS 240

Query: 239 RMAMTERLVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRT--LHSVVKGENE--IS 294
                    ++  +SDGL  FSV+V  +   S+       G  T  +H V +G++   ++
Sbjct: 241 GKG------QAVAFSDGLAAFSVFVEPAGPVSMPTGASLIGATTVYMHQVTEGDSAFLVT 294

Query: 295 VVGDIPPATAQRIAQSV 311
           VVG++PP TA+++A+SV
Sbjct: 295 VVGELPPQTARQVAESV 311