Pairwise Alignments

Query, 321 a.a., sigma-E factor regulatory protein RseB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., sigma-E factor regulatory protein RseB from Klebsiella michiganensis M5al

 Score =  274 bits (701), Expect = 2e-78
 Identities = 141/311 (45%), Positives = 208/311 (66%), Gaps = 8/311 (2%)

Query: 5   LISALTLFCVNSTTAFAEEESAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQ 64
           L++    F VN++     + S+ ALL QMN ASQ LNYELS++ + K  +E L YRHA+ 
Sbjct: 10  LMAGSLFFSVNASA----DTSSGALLQQMNLASQSLNYELSFVSINKQGVESLRYRHAKL 65

Query: 65  DDQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPML-NTDVAELSR 123
           D++ LA L+ L GP REV+ RG E+SY EPG++PFT+ +G+ +  ++P L  +D   L+ 
Sbjct: 66  DNRTLAQLLQLDGPRREVVLRGTEISYFEPGLDPFTL-NGDYIVDSLPSLVYSDFKRLAS 124

Query: 124 YYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYR 183
           YYDF+ VGR R A   C V+RVV +DG RYSY+ W+D ++ LPLR DLLDRDGE LEQ+R
Sbjct: 125 YYDFISVGRTRIADRLCDVVRVVARDGTRYSYIAWLDAETKLPLRVDLLDRDGETLEQFR 184

Query: 184 TISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETF-WQVTWVPDGFQAMELNRYRMAM 242
            +SF+V + ++  M  L+K  LP  L +P+G  +  F W  TW+P G   +  ++ R+  
Sbjct: 185 VVSFNVGDNVSASMETLSKANLPPQLSVPEGGNKANFNWAPTWLPQGVAEVSSSQRRLPT 244

Query: 243 TERLVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPA 302
            +  VES++YSDGLF+FS+ ++ +   S   QL+R GRRT+ + V+   EI++VG++PP 
Sbjct: 245 FDGPVESRLYSDGLFSFSININRATANS-SDQLLRTGRRTVATTVRDNAEITIVGELPPQ 303

Query: 303 TAQRIAQSVMF 313
           TA+RI+ S+ F
Sbjct: 304 TAKRISDSIKF 314