Pairwise Alignments

Query, 156 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 159 a.a., sigma-E factor regulatory protein RseC (RefSeq) from Shewanella amazonensis SB2B

 Score =  100 bits (248), Expect = 1e-26
 Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 7/153 (4%)

Query: 1   MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTT 60
           MM  LA V +V   +    VT+  E +T+C  C +S++CGTG ++ AF  KT  + +++ 
Sbjct: 1   MMEELARVVRV---ETSGWVTVEVEVKTACGHCAASENCGTGAIASAFAGKTQQFSIKSA 57

Query: 61  QALEAGEVVEIGLPEKSVLQSAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTAL 120
           +  E GE++ +GLPE ++L++AALVYLLPL  ++LGA LG +    +L FG     L   
Sbjct: 58  ETFENGELIRLGLPESALLKAAALVYLLPLVGLLLGA-LGGKMAGSVLSFGSETASLVFS 116

Query: 121 LFIALGVWV-AKHYAKVLELRSQQQVVLLRKLG 152
           L  A+  W+  K  AK LE   Q Q V+L +LG
Sbjct: 117 LLGAIVAWLWGKRLAKNLE--RQTQPVILARLG 147