Pairwise Alignments

Query, 156 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 158 a.a., positive regulator of sigma E, RseC/MucC (RefSeq) from Shewanella loihica PV-4

 Score = 87.4 bits (215), Expect = 9e-23
 Identities = 53/140 (37%), Positives = 85/140 (60%), Gaps = 15/140 (10%)

Query: 20  VTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTTQALEAGEVVEIGLPEKSVL 79
           VT+  + + +C+ C ++ +CGT  VSKAF  K   + L +    E GE++++GLPE  +L
Sbjct: 17  VTVEVKVKNACNHCDNNDTCGTSAVSKAFSPKVQRFSLPSDTQYEPGELLKLGLPESVIL 76

Query: 80  QSAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTALLFIALGV-------WVAKH 132
           ++AA+VYL+PL  + +GA LG  +LA     G   ++ + LL IALG+       W+ + 
Sbjct: 77  KAAAIVYLMPLAGLFIGATLG-HFLA-----GLAELVSSDLLTIALGLSGAASAWWLGRR 130

Query: 133 YAKVLELRSQQQVVLLRKLG 152
           +AK LE+ SQ   V+L +LG
Sbjct: 131 WAKTLEINSQP--VILSRLG 148