Pairwise Alignments

Query, 156 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 157 a.a., positive regulator of sigma(E), RseC/MucC (RefSeq) from Shewanella sp. ANA-3

 Score = 95.9 bits (237), Expect = 3e-25
 Identities = 61/149 (40%), Positives = 89/149 (59%), Gaps = 10/149 (6%)

Query: 8   VTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTTQALEAGE 67
           V +VV       +T+  E +++C SC SS+SCGT  V++AF  KT  + +Q+ +  E GE
Sbjct: 5   VARVVACDNQGWLTVEVELKSTCKSCSSSESCGTSAVAQAFSAKTQQFSIQSERTCEVGE 64

Query: 68  VVEIGLPEKSVLQSAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTALLFIALGV 127
           ++++GLPE  +L++AALVYL+PL  +  GA  G Q+ A +L        L+A+ F ALG 
Sbjct: 65  LLKLGLPESVILKAAALVYLMPLLGLFTGAVFG-QFFAGLLEINSD---LSAIAFAALGA 120

Query: 128 WVA----KHYAKVLELRSQQQVVLLRKLG 152
             A    KH AK LE+ SQ   V+L  LG
Sbjct: 121 IAAWFFGKHKAKQLEVDSQP--VILAYLG 147