Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., GTP-binding protein TypA/BipA from Pseudomonas stutzeri RCH2

 Score =  172 bits (435), Expect = 5e-47
 Identities = 156/559 (27%), Positives = 254/559 (45%), Gaps = 66/559 (11%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMA-EQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L+++ G L  +E+  E+V+DS D E+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLRLSGTLDRKELENERVMDSNDQEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            L +       Y +N +DTPGH DF  EV R ++  +  LLVVDA  G   QT      A
Sbjct: 62  ALKWNG-----YNINIVDTPGHADFGGEVERVMSMVDSVLLVVDAQDGPMPQTRFVTQKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTGV----- 167
            +  L  + ++NKID P A P+ V ++I D+   + A D       V  SA  G+     
Sbjct: 117 FKAGLRPIVVVNKIDRPGARPDWVIDQIFDLFDNLGATDEQLDFPIVYASALNGIAGMDH 176

Query: 168 -----GVDEVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
                 +D + + I+  +P+P+ D D P Q  I    ++++LGV+ + RI  G++K N  
Sbjct: 177 EKMDDNMDALFQAIIDHVPSPKVDLDGPFQMQISQLDYNSFLGVIGIGRIARGTIKANSP 236

Query: 223 IKVM-STGQTWGVDRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
           +  + + G+      L I     +    +   E G +VC +  +    + DTL    N  
Sbjct: 237 VTAIGADGKKRNGRILKIMGHSGLQRVEVQEAEAGDIVC-VSGMDELYISDTLCDQNN-- 293

Query: 282 EKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEPETS 331
            +ALP     +P V +  F V+   +           N +D L K  L++ +L  EP  S
Sbjct: 294 VEALPPLTVDQPTV-SMTFQVNDSPFAGKEGKFVTSRNIKDRLEKELLHNVALRVEPGDS 352

Query: 332 AALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLP 391
                 F+    G LH+ ++ E + RE             +E+     E+V ++      
Sbjct: 353 PE---KFKVSGRGELHLSVLIETMRRE------------GFELAVGRPEVVIIE------ 391

Query: 392 AINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
             N+  E +EP     I +   + G V+     ++G   +MV  G  +V L Y IP A  
Sbjct: 392 --NEAGEKQEPYENVTIDIEEQHQGPVMEQMGLRKGDLSNMVPDGKGRVRLEYTIP-ARG 448

Query: 451 VLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGDKVD---ALAIITHRDNSQTR 507
           ++ F +   + + G   L   F  +       V    NG  V      A+    +  Q R
Sbjct: 449 LIGFRNNFLTLTSGSGILTSTFSHYGAIKAGEVTNRQNGVLVSMATGTALTYSLETLQAR 508

Query: 508 GRQLVEKMKEFIPRQMFDI 526
           G+  +    E    Q+  I
Sbjct: 509 GKLFLAPGDEIYEGQLCGI 527