Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., Small GTP-binding protein domain:GTP-binding protein TypA from Pseudomonas syringae pv. syringae B728a

 Score =  150 bits (380), Expect = 1e-40
 Identities = 140/520 (26%), Positives = 235/520 (45%), Gaps = 72/520 (13%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDREMA-EQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L++  G L   E+  E+V+DS D E+ERGITI A++ 
Sbjct: 2   IENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERGELNDERVMDSNDQEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            +++       Y +N +DTPGH DF  EV R ++  +  LL+VDA  G   QT      A
Sbjct: 62  AINWNG-----YHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIED---------------IVGIDAIDAVRCSAK 164
            E  L  + ++NK+D P A P+ V ++I D               +V   A++ +     
Sbjct: 117 FEAGLRPIVVINKVDRPGARPDWVLDQIFDLFDNLGATEEQLDFKVVYASALNGIAGLEH 176

Query: 165 TGVGVD--EVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
           T +  D   + + IV  +PAP+ D D P Q  I    ++++LGV+ + RI  G +K N  
Sbjct: 177 TAMAEDMTPLYQAIVDHVPAPKVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTP 236

Query: 223 IKVMS-TGQTWGVDRLGIFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
           +  +   G+      L +     +    ++    G +VC I       + DTL    N  
Sbjct: 237 VVAIDVNGKKRNGRILKLMGHHGLHRIDVEEAAAGDIVC-ISGFDQLFISDTLCDPLN-- 293

Query: 282 EKALPGFKKVKPQVYAGLFPVSSDDY----------DNFRDALGKLSLNDASLFYEPETS 331
            +A+      +P V +  F V+   +           N ++ L K  L + +L  E   +
Sbjct: 294 VEAMKPLTVDEPTV-SMTFQVNDSPFCGKEGKFVTSRNIKERLDKELLYNVALRVEEGDT 352

Query: 332 AALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLP 391
           A     F+    G LH+ ++ E + RE   ++    P V+  ++   K            
Sbjct: 353 AD---KFKVSGRGELHLSVLIETMRRE-GFEMGVGRPEVIIRMVDGVK------------ 396

Query: 392 AINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
                    EP     I +P +  G ++     ++G   +MV  G  +V L Y+IP A  
Sbjct: 397 --------HEPYENVTIDLPEEAQGAIMEQMGNRKGDLTNMVPDGKGRVRLEYNIP-ARG 447

Query: 451 VLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGD 490
           ++ F +   + + G   L   F R+        DV+ +GD
Sbjct: 448 LIGFRNEFLTLTSGAGILTSIFDRY--------DVMKSGD 479