Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., virulence regulator BipA (RefSeq) from Shewanella amazonensis SB2B

 Score =  160 bits (404), Expect = 2e-43
 Identities = 142/503 (28%), Positives = 230/503 (45%), Gaps = 66/503 (13%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDR-EMAEQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L+   G L  R E  E+V+DS DLE+ERGITI A++ 
Sbjct: 2   LENLRNIAIIAHVDHGKTTLVDKLLSQSGTLESRGEATERVMDSNDLEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            + +       Y++N +DTPGH DF  EV R L+  +  LL+VDA  G   QT      A
Sbjct: 62  AIKWN-----DYRINIVDTPGHADFGGEVERVLSMVDSVLLLVDAVDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTGVGV--- 169
               L+ + ++NK+D P A P+ V +++ D+   + A D       V  SA  G      
Sbjct: 117 FAQGLKPIVVINKVDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDP 176

Query: 170 DE-------VLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
           DE       + + IV  +  P  D +   Q  I    +++Y+GV+ + RIK GS+K N +
Sbjct: 177 DEPSEDMTPLFQTIVEKVSPPDADAEGAFQMQISQLDYNSYVGVIGVGRIKRGSVKTNQQ 236

Query: 223 IKVMSTGQTWGVDRLG-IFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
           + V+         ++G +     ++   + T   G +V  +  +    + DT+  A N  
Sbjct: 237 VTVVGADGKTRNGKIGQVLGYMGLERHEVATANAGDIV-AVTGLGELKISDTICAAGN-- 293

Query: 282 EKALPGFKKVKP------QVYAGLFPVSSDDYDNFRDALGKLS---LNDASLFYEPETSA 332
            +ALP     +P      QV    F      Y   R+ L +L    +++ +L  E   S 
Sbjct: 294 VEALPPLSVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSP 353

Query: 333 ALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLPA 392
                FR    G LH+ I+ E + RE             YE+  +  E++          
Sbjct: 354 D---RFRVSGRGELHLSILIENMRRE------------GYELAVSRPEVI---------- 388

Query: 393 INDIE-EIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
           I +I+ E  EP  +  + V  D+ G VI     ++    DM   G  +V + + IP   +
Sbjct: 389 IKEIDGEKCEPYEQLTVDVEEDHQGTVIEKLGTRKADMKDMQLDGKGRVRIDFVIPSRGL 448

Query: 451 V---LDFFDRLKSTSRGYASLDY 470
           +    +F      T   Y + D+
Sbjct: 449 IGFQTEFMTATSGTGLLYHTFDH 471