Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., GTP-binding protein TypA (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (408), Expect = 6e-44
 Identities = 144/503 (28%), Positives = 231/503 (45%), Gaps = 66/503 (13%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGLSDR-EMAEQVLDSMDLERERGITIKAQSV 59
           ++++RN +IIAH+DHGK+TL D+L+   G L  R E AE+V+DS DLE+ERGITI A++ 
Sbjct: 2   LENLRNIAIIAHVDHGKTTLVDKLLAQSGTLETRGEAAERVMDSNDLEKERGITILAKNT 61

Query: 60  TLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTA 119
            + +       Y++N +DTPGH DF  EV R L+  +  LL+VDA  G   QT      A
Sbjct: 62  AIKWN-----DYRINIVDTPGHADFGGEVERVLSMVDCVLLLVDAVDGPMPQTRFVTKKA 116

Query: 120 IEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSA--------- 163
               L+ + ++NKID P A P+ V +++ D+   + A D       V  SA         
Sbjct: 117 FAQGLKPIVVINKIDRPGARPDWVIDQVFDLFDNLGATDEQLDFPIVYASALNGFATLDP 176

Query: 164 -KTGVGVDEVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKNDK 222
            +TG  +  + E IV  + +P  D +   Q  I    +++Y+GV+ + RIK GS+K N +
Sbjct: 177 EETGADMTPLFETIVEKVSSPDADAEGAFQMQISQLDYNSYVGVIGVGRIKRGSVKVNQQ 236

Query: 223 IKVMSTGQTWGVDRLG-IFTPKQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLAKNGC 281
           + V+    T    ++G +     +D   +     G +V  I  +    + DT+    N  
Sbjct: 237 VTVVGADGTTRNGKIGQVLGYMGLDRHEVAEANAGDIV-AITGLGELKISDTVCAVGNA- 294

Query: 282 EKALPGFKKVKP------QVYAGLFPVSSDDYDNFRDALGKLS---LNDASLFYEPETSA 332
            +ALP     +P      QV    F      Y   R+ L +L    +++ +L  E   S 
Sbjct: 295 -EALPPLSVDEPTLTMTFQVNTSPFAGKEGKYVTSRNILERLQQELVHNVALRVEETDSP 353

Query: 333 ALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYVDSPAKLPA 392
                FR    G LH+ I+ E + RE             YE+  +  E++          
Sbjct: 354 D---RFRVSGRGELHLSILIENMRRE------------GYELAVSRPEVI---------- 388

Query: 393 INDIE-EIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHG-NQVALTYDIPMAEV 450
           + +I+ E  EP     + V  ++ G VI     ++    DM   G  +V + + IP   +
Sbjct: 389 VKEIDGEKCEPYETLTVDVEEEHQGAVIEKLGTRKADMRDMQPDGKGRVRIDFIIPSRGL 448

Query: 451 V---LDFFDRLKSTSRGYASLDY 470
           +    +F      T   Y S D+
Sbjct: 449 IGFQTEFMTATSGTGLIYHSFDH 471