Pairwise Alignments

Query, 597 a.a., elongation factor 4 from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  166 bits (419), Expect = 3e-45
 Identities = 155/562 (27%), Positives = 259/562 (46%), Gaps = 82/562 (14%)

Query: 1   MKHIRNFSIIAHIDHGKSTLSDRLIQVCGGL--SDREMAEQVLDSMDLERERGITIKAQS 58
           M++IRN +IIAH+DHGK+TL D+++ + G L  S++   E +LD+ DLERERGITI +++
Sbjct: 1   MQNIRNIAIIAHVDHGKTTLVDKML-LAGNLFRSNQNSGELILDNNDLERERGITILSKN 59

Query: 59  VTLDYTAKDGQTYQLNFIDTPGHVDFAYEVSRSLAACEGALLVVDAGQGVEAQTLANCYT 118
           V+++Y        ++N IDTPGH DF  EV R L   +G +L+VDA +G   QT      
Sbjct: 60  VSINYNGT-----KINIIDTPGHSDFGGEVERVLNMADGCILLVDAFEGPMPQTRFVLQK 114

Query: 119 AIEMDLEVVPILNKIDLPAAEPERVAEEIEDIV-GIDAID------AVRCSAKTG----- 166
           A+E+ L+ + ++NK+D P   PE V E + D++  ++A +       +  SAK       
Sbjct: 115 ALEIGLKPIVVVNKVDKPNCRPEEVYEMVFDLMFSLNATEDQLDFPVIYGSAKNNWMSTD 174

Query: 167 -----VGVDEVLEKIVSAIPAPQGDPDAPLQALIIDSWFDNYLGVVSLVRIKNGSLKKND 221
                  +  +L+ I+  IPAP+     P Q LI    + +Y G +++ R+  G+LK+  
Sbjct: 175 WQKPTDTITPLLDCIIENIPAPEQLEGTP-QMLITSLDYSSYTGRIAVGRVHRGTLKEGM 233

Query: 222 KIKVMSTGQTW---GVDRLGIFTP-KQVDTDSLDTGEVGWVVCGIKDIMGAPVGDTLTLA 277
            I ++          +  L +F    +V T+ + +G+    +C +  I G  +GDT+   
Sbjct: 234 NITLVKRNGDMFKSKIKELHVFEGLGRVKTNEVSSGD----ICALVGIEGFEIGDTVCDF 289

Query: 278 KNGCEKALPGFKKVKPQVYA-------------GLFPVSSDDYDNFRDALGKLSLNDASL 324
           +N   +ALP     +P +               G F  S   +D     L      D +L
Sbjct: 290 EN--PEALPPIAIDEPTMSMLFAINDSPFFGKDGKFVTSRHIHDRLMKEL------DKNL 341

Query: 325 FYEPETSAALGFGFRCGFLGMLHMEIIQERLEREYDLDLITTAPTVVYEVLKTNKEIVYV 384
                 S   G     G  G+LH+ ++ E + RE   +L    P V++      KEI  V
Sbjct: 342 ALRVRKSEEDGKWIVSG-RGVLHLSVLIETMRRE-GYELQVGQPQVIF------KEIDGV 393

Query: 385 DSPAKLPAINDIEEIREPIARCNILVPADYLGNVITLCIEKRGTQVDMVYHGNQVALTYD 444
                           EPI    I VP +Y   +I +   ++G  V M   G ++ L +D
Sbjct: 394 KC--------------EPIEELTINVPEEYSSKIIDMVTRRKGEMVKMENTGERINLEFD 439

Query: 445 IPMAEVVLDFFDRLKSTSRGYASLDYGFQRFEMSHMVRVDVLLNGDKV---DALAIITHR 501
           +P +  ++     + + S G A + + F+ ++  H   ++   NG  +      A     
Sbjct: 440 MP-SRGIIGLRTNVLTASAGEAIMAHRFKEYQ-PHKGEIEHRTNGSMIAMESGTAFAYAI 497

Query: 502 DNSQTRGRQLVEKMKEFIPRQM 523
           D  Q RG+  +    E    Q+
Sbjct: 498 DKLQDRGKFFIFPQDEVYAGQV 519