Pairwise Alignments

Query, 298 a.a., signal peptidase I from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., signal peptidase I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  352 bits (902), Expect = e-102
 Identities = 175/307 (57%), Positives = 229/307 (74%), Gaps = 11/307 (3%)

Query: 1   MANTFSLILVIVTLVTGIVWTLEKLVWAKKRQQKQAHLQAQTPDMPASALDKVVAQPWWI 60
           MA  FS+ILV+VTL++G++W ++ LV+A KR  +    +     +   A   ++ +   +
Sbjct: 1   MAAYFSIILVLVTLISGLIWLVDVLVFAPKRAARLLLAKESNASLTEEAEYSIMRESTIV 60

Query: 61  ENSVSIFPVIAFVLVLRSFIYEPFQIPSGSMMPTLLVGDFILVEKYAYGLKDPVWRTQLV 120
           E + SIFPVIAFVL+LRSFIYEPFQIPSGSMMPTLLVGDFILVEK++YGLKDPVWRT+L+
Sbjct: 61  ETAHSIFPVIAFVLILRSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGLKDPVWRTKLI 120

Query: 121 ETGKPERGDIVVFKYPVNPEIDYIKRVVGMPGDTVRYSAGKELCIQHQ---GESEC---Q 174
           ETG+P+RGD++VFKYP NP+IDYIKRVVG+PGD + Y   K+L IQ      +++C   +
Sbjct: 121 ETGEPKRGDVIVFKYPENPQIDYIKRVVGLPGDRIIY-RNKQLMIQKACGVEQTQCPEPE 179

Query: 175 AVKLSNVQESEFYQNEIPLIQLNEQLGKVEHNILVNPLSIDNVANYRPRSG---VNEWVV 231
            V  + V   +F Q+ +PL++  EQLG+V H+IL+NP S  ++  Y  R G     E++V
Sbjct: 180 LVARTEVSRGDFSQDGVPLLRYKEQLGEVAHDILINP-SRPDMLGYFKRDGDLPAGEFLV 238

Query: 232 PQGHYFVMGDNRDNSADSRFWGFVPEQNLVGKAVAIWISFEFERAEDSVLPRWIPTGVRF 291
           P+GHYF MGDNRDNS DSRFWG VPE+NLVGKAVAIWISFEF+R +   LP W+P+G+RF
Sbjct: 239 PEGHYFAMGDNRDNSTDSRFWGVVPEENLVGKAVAIWISFEFDRTKADFLPTWLPSGIRF 298

Query: 292 NRVGGIH 298
            RVGGIH
Sbjct: 299 ERVGGIH 305