Pairwise Alignments

Query, 298 a.a., signal peptidase I from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., signal peptidase I (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)

Query: 210 NPLSIDNVANYRPRSGVNEWVVPQGHYFVMGDNRDNSADSRFWGFVPEQNLVGKAVAIWI 269
           N L I     Y      +++     +Y++MGDNR NSADSR+WGFVPE ++VGK + +W+
Sbjct: 411 NKLEIKPDGIYINGEKTDQYTFKMDYYWMMGDNRHNSADSRYWGFVPEDHVVGKPIVVWL 470

Query: 270 SFEFERAEDSVLPRWIPTGVRFNRV 294
           S + +R        W    +R+NR+
Sbjct: 471 SLDKDRG-------WFDGKIRWNRL 488



 Score = 46.6 bits (109), Expect = 1e-09
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 30/112 (26%)

Query: 60  IENSVSIFPVIAFVLV----LRSFIYEPFQIPSGSMMPTLLVGDFILVEKYAYG------ 109
           + N +S    I F LV    +  +I++ +QIPS S+  +LLVGDF+ V K +YG      
Sbjct: 60  VRNVMSWVDAIVFALVAVYFVNIYIFQNYQIPSSSLEKSLLVGDFLYVSKMSYGPRVPNT 119

Query: 110 -------------------LKDPVWRTQLVE-TGKPERGDIVVFKYPVNPEI 141
                              ++ P W+ + V   GK +  DIVVF +P    +
Sbjct: 120 PLSMPLAQHTLPILNTKSYIEWPQWKYKRVPGFGKVKLNDIVVFNFPAGDTV 171



 Score = 30.8 bits (68), Expect = 7e-05
 Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 1/31 (3%)

Query: 131 VVFKYPVNPEIDYIKRVVGMPGDTVRYSAGK 161
           VV++ PV+   +Y+KR VG+PGDT++   G+
Sbjct: 231 VVYR-PVDRRENYVKRCVGLPGDTLQIVDGQ 260