Pairwise Alignments

Query, 225 a.a., ribonuclease 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., ribonuclease III from Methanococcus maripaludis JJ

 Score =  114 bits (285), Expect = 2e-30
 Identities = 77/227 (33%), Positives = 126/227 (55%), Gaps = 19/227 (8%)

Query: 7   KLTSKLGYTFKETELLNLALTHRS-------ANGKHNERLEFLGDSILSFVIADELYRRF 59
           KL SKL   F +  +   A  H S        N ++NERLE+LGD++L  +I++ L+++ 
Sbjct: 6   KLLSKLDIQFNDLNIFKRAFMHSSYINEQKNTNLENNERLEYLGDAVLDLIISEYLFKK- 64

Query: 60  PKVNEGDMSRMRATLVRGNTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAII 119
             ++EG+MS++RA  V  + L    ++    +Y+ LG GEL S G+ + +I++D  EA I
Sbjct: 65  ENLSEGEMSKLRAKYVCESALFTYAKKLKFNNYILLGKGELNSEGYNKPAIVSDVFEAFI 124

Query: 120 GAIYLDSDLETARSIVLEWYHGRLEEIKPGASQ--KDPKTRLQEFLQGRRKPLPVYTVTN 177
            AIYLD  L++ +  V   Y+  +  I+  + +   D KT+LQE + G       Y    
Sbjct: 125 AAIYLDQGLDSVKKFV---YNHIIPIIEKSSKEFFIDYKTKLQE-IPGLSNKTIKYVNLE 180

Query: 178 IKGEAHNQEFTVACEVAGMDTPVIGK--GTSRRKAEQAAAETALEQL 222
             GEAH+++F V  +    D  ++GK  G S+++AE  AA+ AL +L
Sbjct: 181 ETGEAHDKKFVVTVK---SDRNILGKGIGKSKKEAEMKAAKNALLKL 224