Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Small GTP-binding protein domain (NCBI) from Rhodospirillum rubrum S1H

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 6/156 (3%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           VAI+GRPNVGKSTL N L G++++I    P  TR R  G  +  +     VDT GL    
Sbjct: 4   VAIIGRPNVGKSTLFNRLCGRRLAIVHDMPGVTRDRREGKASLADLVFRVVDTAGLEEAG 63

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTK-LQKANFPVVLCVNKVDQV 152
              +   M +    +LS+ ++ L +++        +  F + L+KA  PV+L  NK +  
Sbjct: 64  PEVLEGRMRQQTDRALSEAHVALMLIDSRAGVTPLDAHFAEILRKAPIPVILVANKCEGG 123

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVL 188
             +          S  M   D VP+SA+ G+   +L
Sbjct: 124 AGKPG-----FYESYSMGLGDPVPLSAEHGEGLSLL 154



 Score = 53.5 bits (127), Expect = 1e-11
 Identities = 60/214 (28%), Positives = 89/214 (41%), Gaps = 13/214 (6%)

Query: 20  SVVASTPENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNY 79
           SV A  P  +    +AI+GRPN GKSTL+N L+G    +T  +   TR  I      G  
Sbjct: 221 SVEAFDPRGERPIQMAIIGRPNTGKSTLINRLIGDDRLVTGPEAGVTRDAIEVDWEWGGR 280

Query: 80  QAIYVDTPGLHIEEKRAINRLMNRAASSSLSDVNL----VLFVVEGTHWTADDEMVFTKL 135
           +   VDT GL   + R  N L     + +L+ + L    VL +         D  +   +
Sbjct: 281 RFRLVDTAGLR-RKARVENSLEKLMVADTLNAIRLAEVCVLMLDANMVMDRQDLTIARLV 339

Query: 136 QKANFPVVLCVNKVDQVKDRNEVMLHM---LELS-KRMQFVDIVPISAKQGKNTDVLKKH 191
                 +V+ VNK D   DR   +  +   LE S  +++ V  V +SA +G   + L   
Sbjct: 340 IDEGRALVIAVNKWDACADRKAALQRLADRLETSLAQVRGVPFVTLSALEGHGLNRLMDA 399

Query: 192 VRDHLPKAVHHFPEEYVTDRSQRFMASEIVREKL 225
             +   K     P    T R  R++   I R  L
Sbjct: 400 ALEAHAKWNRRVP----TSRFNRWLKGMIDRHPL 429