Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., ribosome biogenesis GTPase Der from Rhodopseudomonas palustris CGA009

 Score = 82.0 bits (201), Expect = 3e-20
 Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           +AI+GRPNVGKSTL N L+GQK+++    P  TR R  G    G+     +DT GL    
Sbjct: 5   LAIIGRPNVGKSTLFNRLVGQKLALVDDAPGVTRDRREGEGRLGDLNFTLIDTAGLDEGP 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKL-QKANFPVVLCVNKVDQV 152
           K ++   M     +++   + +LFV +       ++  F    ++AN PVVL  NK +  
Sbjct: 65  KGSLTARMQEQTETAIELADALLFVFDARAGLTPNDRAFADFARRANKPVVLVANKSEGK 124

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPKAVHHFPEEYVTDRS 212
                 M      S  +   D V ISA+ G+    L   +R  LP+ V    ++   D+S
Sbjct: 125 SGEIGAM-----ESYALGLGDPVQISAEHGEGMGELYDALRPLLPEPVEDEEDDEPADQS 179

Query: 213 QRFMASEIVR 222
           +  +A+  +R
Sbjct: 180 EEAIATRPIR 189



 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 11/170 (6%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRI-MGVETDGNYQAIYVDTPGL--- 89
           VAIVGRPN GKST +N LLG++  +TS +  TTR  I + VE  G    ++ DT GL   
Sbjct: 190 VAIVGRPNAGKSTFINRLLGEERLLTSPEAGTTRDSIAVEVEWKGRDFRVF-DTAGLRRR 248

Query: 90  -HIEEKRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKLQKANFPVVLCVNK 148
             IEEK     + +   +   ++V +VL +     +   D  +   +++    +V+ VNK
Sbjct: 249 SRIEEKLEKLSVADALRAVRFAEV-VVLMMDAQNRFEEQDLRIADLVEREGRALVIAVNK 307

Query: 149 VDQVKDRNEVMLHML----ELSKRMQFVDIVPISAKQGKNTDVLKKHVRD 194
            D ++ +   +  +         +++ V IV  S   G+  D L + ++D
Sbjct: 308 WDLIERQGGQIAQLRTDADHWLPQIKGVPIVATSGMLGEGVDRLMQAIQD 357