Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 490 a.a., small GTP-binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 39/118 (33%), Positives = 64/118 (54%), Gaps = 1/118 (0%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           +AIVGRPNVGKSTL N L+G+++++   +P  TR    G    G+ +   +DT GL    
Sbjct: 5   LAIVGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDLREGAARLGDLRFTVIDTAGLEEAT 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFPVVLCVNKVD 150
             ++   M R    ++S  +  LF+++     T  DE+    L+++N  V+L  NK +
Sbjct: 65  DDSLQGRMRRLTERAVSMADACLFLIDARVGVTPTDEVFADILRRSNAHVLLGANKAE 122



 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 50/168 (29%), Positives = 83/168 (49%), Gaps = 11/168 (6%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRI-MGVETDGNYQAIYVDTPGLHIE 92
           VA+VGRPN GKSTL+N LLG+   +T  +   TR  I + ++ DG    I+ DT G+  +
Sbjct: 205 VAVVGRPNAGKSTLINQLLGEDRLLTGPEAGITRDAISLAMDWDGLPVRIF-DTAGMR-K 262

Query: 93  EKRAINRLMNRAASSSLSDVN----LVLFVVEGTHWTADDEMVFTKLQKANFPVVLCVNK 148
           + +   +L   + S  L  V     +V+ +  G  +   D  +    ++    VV+ VNK
Sbjct: 263 KAKVQEKLEKLSVSDGLRAVKFAEVVVVLLDAGIPFEQQDLRIADLAEREGRAVVIAVNK 322

Query: 149 VDQVKDRNEVMLHMLELSKR----MQFVDIVPISAKQGKNTDVLKKHV 192
            D   D+   +  + E  +R    ++   +V +SAK G+  D L+  V
Sbjct: 323 WDMEDDKQGKLKELKEAFERLLPQLRGAPLVTVSAKTGRGMDRLRDAV 370