Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., putative phosphoglycerate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 6/153 (3%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           VAIVGRPNVGKSTL N L   + +I + +  TTR R  G       +   VDT G  +  
Sbjct: 5   VAIVGRPNVGKSTLFNRLTKTRQAIVNEEAGTTRDRQYGKSEWLGREFSVVDTGGWVVNS 64

Query: 94  KRAINRLMNRAASSSLSDVNLVLFVVEGTHWTAD-DEMVFTKLQKANFPVVLCVNKVDQV 152
                  + +    ++ + +++LFVV+  +   D D  V T L++AN PV++  NK    
Sbjct: 65  DDIFEEEIRKQVLLAVEEADVILFVVDVMNGVTDLDMQVATILRRANSPVIMVANKT--- 121

Query: 153 KDRNEVMLHMLELSKRMQFVDIVPISAKQGKNT 185
            D NE+  +  E  K +   D   ISA  G  T
Sbjct: 122 -DNNELQYNAPEFYK-LGLGDPYCISAITGSGT 152



 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 7/146 (4%)

Query: 35  AIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEEK 94
           A+VGRPN GKS+++N  +G+  +I +    TTR  I        +    VDT G  I +K
Sbjct: 179 AVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGFDFYLVDTAG--IRKK 236

Query: 95  RAINRLMNR----AASSSLSDVNLVLFVVEGTHWTADDEM-VFTKLQKANFPVVLCVNKV 149
             +N  +       +  S+ + ++ + +++ T      ++ + + +QK    +V+ +NK 
Sbjct: 237 NKVNEDLEYYSVVRSIRSIENADVCILMLDATRGVESQDLNILSLIQKNQKGLVVVINKW 296

Query: 150 DQVKDRNEVMLHMLELSKRMQFVDIV 175
           D ++D+   M+   E + R +F   V
Sbjct: 297 DLIEDKTAKMMKEFEATIRSRFAPFV 322