Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., putative GTP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  211 bits (537), Expect = 2e-59
 Identities = 109/290 (37%), Positives = 181/290 (62%), Gaps = 4/290 (1%)

Query: 32  GFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHI 91
           GFV IVG PNVGKSTL+N L+G++ISI + K QTTRHRIMG+    + Q ++ DTPG+ +
Sbjct: 5   GFVNIVGNPNVGKSTLMNALVGERISIATFKAQTTRHRIMGIYNTDDMQIVFSDTPGV-L 63

Query: 92  EEKRAINRLMNRAASSSLSDVNLVLFVVEGTHWTADDEMVFTKLQKANFPVVLCVNKVDQ 151
           +    +   M   ++S+L+D +++L+V +       +     K+++   PV+L +NK+D 
Sbjct: 64  KPNYKLQESMLNFSTSALTDADVLLYVTDVVETPDKNNEFMGKVRQMTVPVLLLINKID- 122

Query: 152 VKDRNEVMLHMLELSKRMQFVDIVPISAKQGKNTDVLKKHVRDHLPKAVHHFPEEYVTDR 211
           + D+ +++  + E  + +   +I+PISA    N D + K +++ LP +  +F ++  TD+
Sbjct: 123 LTDQEKLIKLVEEWKELLPQAEIIPISAASKFNVDYVMKRIQELLPDSPPYFGKDQWTDK 182

Query: 212 SQRFMASEIVREKLMRFTGEELPYSVTVEIERFDYNPDTDGFHINALILVERIGQKKMVI 271
             RF  +EI+REK++ +  +E+PYSV V +E F    +    HI A+I VER  QK ++I
Sbjct: 183 PARFFVNEIIREKILLYYDKEIPYSVEVVVEEF--KEEAKKIHIRAVIYVERDSQKGIII 240

Query: 272 GKNGEKIKTIGREARLDMEELFGRKVYLETWVKVKSGWADDERALRSLGY 321
           GK G+ +K +  EAR ++E  FG+ ++LET+VKV   W   ++ LR+ GY
Sbjct: 241 GKQGKALKKVATEARRELERFFGKTIFLETYVKVDKDWRSSDKELRNFGY 290