Pairwise Alignments

Query, 325 a.a., GTPase Era from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., ribosome biogenesis GTPase Der from Bifidobacterium breve UCC2003

 Score = 68.2 bits (165), Expect = 6e-16
 Identities = 43/120 (35%), Positives = 65/120 (54%), Gaps = 2/120 (1%)

Query: 32  GFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHI 91
           G +AIVGRPNVGKS+L+N +LG++ ++    P  TR R+             VDT G   
Sbjct: 273 GVLAIVGRPNVGKSSLVNRILGRRAAVVEDTPGVTRDRVSYDAEWAGTDFKLVDTGGWEA 332

Query: 92  EEKRAINRLMNRAASSSLSDVNLVLFVVEG-THWTADDEMVFTKLQKANFPVVLCVNKVD 150
           + +  I   +   A  +++  + V+FVV+G    T  DE +   L+ +  PVVL VNK+D
Sbjct: 333 DVE-GIESAIASQAQVAVTLADAVVFVVDGQVGMTTTDERIVKMLRASGKPVVLAVNKID 391



 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 17/168 (10%)

Query: 34  VAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDTPGLHIEE 93
           VA+VGRPNVGKS+LLN L   + ++ +    TTR  +  +        +++DT G+    
Sbjct: 450 VALVGRPNVGKSSLLNQLAHSERAVVNDLAGTTRDPVDEIVDIDGEDWLFIDTAGI---- 505

Query: 94  KRAINRLMNRAASSSL--------SDVNLVLFVVEGTHWTADDEM-VFTKLQKANFPVVL 144
           KR  ++L      SSL        S++ L+LF  + +   +D ++ V +    A   +VL
Sbjct: 506 KRRQHKLTGAEYYSSLRTQAAIERSELALILF--DASQPISDQDLKVMSTAVDAGRAIVL 563

Query: 145 CVNKVDQVKDRNEVMLHMLELSK--RMQFVDIVPISAKQGKNTDVLKK 190
             NK D + + ++  L  L  ++  R+ + + V +SAK G +T+ L +
Sbjct: 564 VFNKWDAMDEFDKQRLERLWNTEFDRVMWAERVNLSAKTGWHTNRLAR 611