Pairwise Alignments

Query, 241 a.a., DNA repair protein RecO from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., DNA repair protein RecO (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (335), Expect = 3e-36
 Identities = 89/234 (38%), Positives = 127/234 (54%), Gaps = 4/234 (1%)

Query: 5   LQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGALQPFTPLLLKWSGN 64
           + R +VLH RPY ESS+++++  +  GRV  +A+   GK S +K  LQPF PLL + SG 
Sbjct: 1   MHRGYVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTS-IKSILQPFQPLLFQLSGR 59

Query: 65  GSMKTLRQAEPISLGLPLSGVYLYSAMYINELVDRVLMPEVASPGLFHDYLFALTELAQS 124
            S+K+L Q E  S  +PLSG   ++  Y+NEL+ R L  E  +   F  Y   L  +A +
Sbjct: 60  SSLKSLYQVEAASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMAAA 119

Query: 125 TNPEPALRRFELALLAAMGYGVDFLHCAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFL 184
            + E  LR+FEL+LL  +G  +  L+    G P+  D  YR   ++GF  ++      F 
Sbjct: 120 FS-EAQLRQFELSLLKELGV-MPSLNLDIEGSPIETDFYYRLLSEEGFSTALGPKPNHFS 177

Query: 185 GNELIAISERRFTSKEQLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARS 238
           G  L A+ E R T  +  + AK   R  L P LG KPLKSR LF +   P + S
Sbjct: 178 GEMLRALEEDRLTEAD-FKQAKLLMRQLLSPLLGDKPLKSRALFLKGNRPSSYS 230