Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Inner membrane protein YfiN from Pseudomonas fluorescens FW300-N2E2

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 50/380 (13%)

Query: 52  LALSLSNSAAIALYVNNYDIASEVMDALLLHQEINAVKLASVDGIVFERTTIPSTYKEQN 111
           +A S++ +   A+  ++   A+E +  +   +E+   ++ +  G +  R   P T     
Sbjct: 54  IARSINYTVEAAVVFDDPAAATEALALIASTEEVADAQVFNKHGRLLARWQRPETGLLSG 113

Query: 112 YWSDANRYRLDSPVD------GNLIGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTF 165
                 +  L+ P+       G  IG +++      +    +  +L  +A +++   V+ 
Sbjct: 114 LEVHIAKAFLEKPISLPIVHQGRNIGSILLAGHGGSL----LRFLLSGLAGIILCTAVSA 169

Query: 166 IALIWIVRR---LVGKPLTDLSQALSEVRPDH--DRKVAVAAEDHHNEIGLVAKSINEFI 220
              +++ RR    +  PL  L++     R +   DR+V  AA     E+  +A   N  +
Sbjct: 170 WVALYLARRQLRAITGPLRSLAEVAHAARSERALDRRVPPAAIA---ELDNLANDFNALL 226

Query: 221 DASHQALLRERELRQQIERWESYYR----TIAEQ---DTLTGLKNRLGCEKFVLRKQRAS 273
           D              ++E W+++ +    T+A Q   D+LTGL NR   E  ++R  R +
Sbjct: 227 D--------------ELESWQTHLQSENETLAHQASHDSLTGLPNRAFFEGRLIRALRNA 272

Query: 274 TTM----VLLLIDLDGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDE 329
           + +     +L +D D FK +ND  GHAAGD VL  +A R  A  +    D +V RLGGDE
Sbjct: 273 SKLNEQVAVLYLDSDRFKGINDNFGHAAGDAVLTAVATRVRAQLR---EDDLVARLGGDE 329

Query: 330 FAIYI-PLDEFVAESIERFAAQLIESSSEPIGL-GQQSAQVGCSIGISHMNSLHIDLEKL 387
           FA+ + PL +  AE  ER A ++I S   PI L G  S     SIGI+           L
Sbjct: 330 FAVLLAPLHK--AEDAERIAEKIIASMEMPIQLPGNASVLTSLSIGIAVYPDDGATPGTL 387

Query: 388 LLQADKAMYWVKYRGKHGYH 407
           L  AD AMY  K   + G H
Sbjct: 388 LHAADAAMYQAKRLARGGQH 407