Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 92.8 bits (229), Expect = 4e-23
 Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 9/174 (5%)

Query: 247 IAEQDTLTGLKNRLGCEKFV---LRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLR 303
           ++  D LTGL NR    + +   L  +  S  + LL++DLD FK +ND+LGH AGD VL 
Sbjct: 429 LSMHDALTGLPNRNKLARHLDDALVAKEHSAPLTLLMVDLDNFKPINDSLGHPAGDAVLL 488

Query: 304 EIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLGQ 363
           E+A+R   L        +V RLGGDEF + +   E   E I+RF  +LI+S  +PI    
Sbjct: 489 EVAQR---LRDCTREQDLVARLGGDEFVVVLNGMEHTTE-IDRFCERLIDSLQQPILYET 544

Query: 364 QSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHG--YHIYRMGEEI 415
            S  +G SIGI+          +L+  AD A+Y  K  GK    Y   +M ++I
Sbjct: 545 HSLHIGASIGIAVSRRQGYVPGELIRCADIALYQAKSEGKKTWCYFASQMNDQI 598