Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 1003 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 95.9 bits (237), Expect = 5e-24
 Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 15/222 (6%)

Query: 194 HDRKVAVAAEDHHNEIGLVAKSINEFIDASHQ--ALLRERELRQQIERWESYYRTIAEQD 251
           H+RKV      + N +   + +  + ID +     +  ER+L       E   R + + D
Sbjct: 496 HERKVLGTFALYANTVRSPSAAETQLIDMATPLAGIAIERQLT------EKRIRFMGDHD 549

Query: 252 TLTGLKNRLGCE----KFVLRKQRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLREIAK 307
            LTGL NR   E    + +L  QR +  + ++ +DLD FK VND+LGH+AGDE+L+ +A+
Sbjct: 550 ALTGLPNRTLLEDRLKQAMLYAQRYNRLVTVVFLDLDKFKLVNDSLGHSAGDELLKTVAQ 609

Query: 308 RFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLGQQSAQ 367
           R   L     +D VV RLGGDEF I +       + +     ++ E+   PI L   +  
Sbjct: 610 RM--LGCVRRTDTVV-RLGGDEFVIILFDQPSDLDGVTPVLHKIQEAILRPIQLSGHTLH 666

Query: 368 VGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
           V CS+G++   +   D + LL  AD AMY  K  G++ +  Y
Sbjct: 667 VTCSMGLATYPTDGTDTDTLLSNADAAMYRAKELGRNSFQFY 708



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 157 VLIQFLVTFIALIWIVRRLVGKP-LTDLSQALSEVRPDHDRKVAVAAEDH-HNEIGLVAK 214
           VLI    + +   ++ R  +G+  L  L++   ++R +H  K  +   DH  +EIG +A+
Sbjct: 277 VLIMLGASLVFAWFVTRVFMGRHVLVRLNEISRQLRQEHTDKTHLMMADHGKDEIGNMAR 336

Query: 215 SINEFIDASHQALLRERELRQQIER 239
           ++N+F++   Q   R  +L    ER
Sbjct: 337 AVNQFLEDRLQLEKRTAQLCIATER 361