Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 64/167 (38%), Positives = 90/167 (53%), Gaps = 8/167 (4%)

Query: 247 IAEQDTLTGLKNRLGCEKFVLRK----QRASTTMVLLLIDLDGFKQVNDTLGHAAGDEVL 302
           +A  D LT L NR    K + +      R    + +L +DLD FKQVNDTLGH AGD++L
Sbjct: 356 LAYHDGLTALPNRSLFSKLLSQSIGEASRYHRQLAVLFLDLDRFKQVNDTLGHDAGDQLL 415

Query: 303 REIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESSSEPIGLG 362
           +E+A R  A  +T  SD  V RLGGDEF I +P +    + +   A +++ + + P  L 
Sbjct: 416 KEVALRLKACLRT--SD-TVARLGGDEFVILLP-ELSDDKDVATAAQKVLGAIARPFNLQ 471

Query: 363 QQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
            Q  +V  S+GIS      +D + L   AD AMY  K  GK+ +  Y
Sbjct: 472 GQEFRVTASVGISVFPQDGLDEQTLKKNADIAMYQAKQCGKNNFQFY 518