Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 85/300 (28%), Positives = 138/300 (46%), Gaps = 27/300 (9%)

Query: 113 WSDANRYRLDSPVDGNL-----IGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIA 167
           W D N Y   +     +     +G+ ++      +   A  ++ ++I +      V F  
Sbjct: 249 WPDGNLYLAGAAQSIGVDDYPGLGWTVVTRQPAEVAFAASREMRNEILLWGGLLSVLFAV 308

Query: 168 LIWIVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAEDHHNEIGLVAKSINEFIDASHQAL 227
           + WIV  ++  P+  +++A + +    D  V +       E+  ++ +I   +D+    L
Sbjct: 309 IGWIVAGILTGPVNVIAEAAARLSEGAD--VGIPLLKGTREVETLSVAIRHLVDS----L 362

Query: 228 LRERELRQQIERWESYYRTIAEQDTLTGLKNRLGCEKF---VLRKQRASTTMVLLLIDLD 284
            R+R     +E        IA +D +TGL NR   EK+   V  +        +L +DLD
Sbjct: 363 TRKRGQLAVVEG-------IAYRDVVTGLPNRAALEKYIEAVRNEVDVQPGFGVLCLDLD 415

Query: 285 GFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVA-ES 343
           GFK VND  GHA GD +L+E+   F  LA     D  V R GGDEF + + L    A  S
Sbjct: 416 GFKPVNDRFGHAVGDALLQEVG--FRLLAAVRDGDIAV-RHGGDEFVLLLRLRTGEALSS 472

Query: 344 IERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGK 403
           ++  A ++I   +EP+ L  +S  +GCSIG +       +    L QAD+A+Y  K  GK
Sbjct: 473 LQGAAQRIIARLAEPVVLAGESITIGCSIGATLWTG--GEFADALAQADEALYRAKRAGK 530