Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 778 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  102 bits (254), Expect = 4e-26
 Identities = 76/225 (33%), Positives = 115/225 (51%), Gaps = 24/225 (10%)

Query: 218 EFI--DASHQALLRERELRQQIERWESYYRTIAEQDTLTGLKNRL----GCEKFVLRKQR 271
           EFI  + + Q +   +  +QQ+ER        A  D LTGL NR+      E+ + R  R
Sbjct: 324 EFICYEGTVQDISERKHYQQQLERQ-------ANHDLLTGLPNRILLNDRIEQGLARAAR 376

Query: 272 ASTTMVLLLIDLDGFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFA 331
               + L+ IDLD FK +ND LGH AGDE+L+ IA R   LA +      V R+GGDEF 
Sbjct: 377 LGYYLTLVFIDLDNFKFINDGLGHVAGDELLKSIAAR---LAGSLRGSDTVARVGGDEFV 433

Query: 332 IYIPLDEFVAESIERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQA 391
           + +  D +   ++     +++     P+ L  +  QVG SIG++       D + LL  A
Sbjct: 434 LVLS-DHYRISTVISLLERVLNEIRRPVTLAGREFQVGASIGVAMFPGDGEDAQTLLKHA 492

Query: 392 DKAMYWVKYRGKHGYHIY-----RMGEEILPLPSAKE--LKQDQF 429
           D AMY  K RG++ +  +     R+ +E L L +A    L++D+F
Sbjct: 493 DIAMYAAKKRGRNNFQFFTHDLNRIADERLNLEAAMRAALERDEF 537