Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 6e-27
 Identities = 100/414 (24%), Positives = 182/414 (43%), Gaps = 25/414 (6%)

Query: 10  LVNRLLKMISLCALGYLLIILAIIIPRGIQSVEQQKQELEEKLALSLSNSAAIALYVNNY 69
           L  +LL+++ L AL   L++    I  G     Q  +   +++     + +  A+Y  + 
Sbjct: 9   LSRKLLRVVLLSALAVGLVLSCAQIIFGAYKTRQLIEADAQRILRMTRDPSTQAIYSLDR 68

Query: 70  DIASEVMDALLLHQEINAVKLASVDGIVFERTTIPSTYKEQNYWSDANRYR--------L 121
           ++ ++VM+ L  H+ I    +   D  +      P       + +D    R        +
Sbjct: 69  EMGAQVMEGLFQHESIRMASIGHPDEGMLALKIRPPISLPTRWLTDPILGRDQQFSIPLI 128

Query: 122 DSPVDGNLIGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIALIWIVRRLVGKPLT 181
             P      G L I  D     Q+ +N  +    + L++ L     L  I + L+ +PLT
Sbjct: 129 GKPPYNEYYGELRITLDTAQYGQEFVNDSVVIFILGLLRALTLGFVLFLIYQWLLTRPLT 188

Query: 182 DLSQALSEVRPDH--DRKVAVAAEDHHNEIGLVAKSINEFIDASHQALLRERELRQQIER 239
            L + L+++ PD   + K+ +      NE+GL  ++ N  +     ++     LRQ+ E 
Sbjct: 189 KLIEHLAQINPDRPGEHKLPMIRGHERNELGLWVETANGLL----ASIEHNMHLRQEAE- 243

Query: 240 WESYYRTIAEQDTLTGLKNRLGCEK----FVLRKQRASTTMVLLLIDLDGFKQVNDTLGH 295
             S    + + D+LTGL NR   +      +   +R    + +L + LD FK VN+   +
Sbjct: 244 --SSLHRLTQYDSLTGLPNRQQLQSQLDHILDEARRLQRRIAVLCLGLDDFKGVNEQYSY 301

Query: 296 AAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIERFAAQLIESS 355
            AGD +L+ +A R  A ++T      + RLGGD+F + +   E   E+ E  A  +++  
Sbjct: 302 QAGDYMLQALADRLRA-SETRLG--ALARLGGDQFVLVLSGIEQPYEAAE-LAQAVLDDL 357

Query: 356 SEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGYHIY 409
             PI L     ++  +IGI+       + EKLL +A++ M   K R ++ Y  Y
Sbjct: 358 ENPIELDGHPIRLRATIGITLYPEDGDNTEKLLQKAEQTMTLAKSRSRNRYQFY 411