Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 719 a.a., PAS:GGDEF from Pseudomonas syringae pv. syringae B728a

 Score =  105 bits (261), Expect = 6e-27
 Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 15/183 (8%)

Query: 231 RELRQQIERWESYYRTIAEQDTLTGLKNRLGC----EKFVLRKQRASTTMVLLLIDLDGF 286
           R+L QQ+E+        A  D LTGL NR G     E  +LR +RA   +V+L +DLDGF
Sbjct: 273 RDLYQQLEKQ-------AVTDALTGLLNRRGLYQAVESMLLRNERADKYLVVLFMDLDGF 325

Query: 287 KQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIER 346
           KQ+NDTLGH AGD+VL  +A++F    + +    V+ R+GGDEF + I   ++  E   +
Sbjct: 326 KQINDTLGHEAGDQVLLWVAEQFKDSMRPY---DVLARIGGDEFTVVIDGLDY-PEQAAK 381

Query: 347 FAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHGY 406
            A +LIE  S    +      +G S+GI+       +L+ LL  AD AMY  K  G+  Y
Sbjct: 382 IAEKLIERVSGRRQVDGVEITLGASVGIATFPDCGSNLDGLLRAADIAMYEAKRAGRQQY 441

Query: 407 HIY 409
             Y
Sbjct: 442 RFY 444