Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Synechococcus elongatus PCC 7942

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 64/184 (34%), Positives = 96/184 (52%), Gaps = 18/184 (9%)

Query: 231 RELRQQIERWESYYRTIAEQDTLTGLKNRL-----GCEKFVLRKQRASTTMVLLLIDLDG 285
           R+  + +ER   Y       D LTGL NR      G E  +L K R+   + ++ IDLD 
Sbjct: 456 RDNEKALERQACY-------DFLTGLANRFLLQEQGQELLLLAK-RSQEMLAVIFIDLDR 507

Query: 286 FKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEFVAESIE 345
           FK +ND  GH  GD VL E+A+R   + Q+     ++ RL GDEF + +P  +  A+   
Sbjct: 508 FKDINDNFGHEVGDRVLVEVAQR---IRQSVRQSDLIARLSGDEFVVILPNTD--AQGAA 562

Query: 346 RFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGKHG 405
             A +L +  + PI +G +S Q+  S+GIS       DLE L+ +AD AMY +K  G+  
Sbjct: 563 TLAQKLQQQITPPIAIGDRSIQLTTSLGISLFPVDGDDLEILIKKADTAMYSIKEGGRDA 622

Query: 406 YHIY 409
           +  +
Sbjct: 623 FSFF 626