Pairwise Alignments

Query, 430 a.a., sensor domain-containing diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 680 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  122 bits (307), Expect = 3e-32
 Identities = 114/427 (26%), Positives = 186/427 (43%), Gaps = 41/427 (9%)

Query: 6   RTSPLVNRLLKMISLCALGYLLIILAIIIPRGIQSVEQQKQELEEKLALSLSNSAAIALY 65
           R   L  +   ++   AL + + I  I +   + S  +     +++L  S+   AA A++
Sbjct: 4   RFKSLTWKQTNLVVFTALFFAVAIFIIELALMVMSTREALTSSQQELLDSVEQPAANAVW 63

Query: 66  VNNYDIASEVMDALLLHQEINAVKLASVDGIVFERTTI-PSTYKE------QNYWSDANR 118
             + ++A + ++ +L  + + A  +   DG +F   T   +TY        +  + D   
Sbjct: 64  ALDDNLARQTLEGVLKVEHVGASVIELDDGSMFVSVTNGKNTYSNFFNSLSEELFGDLRE 123

Query: 119 --------YRLDSPVDGNLIGYLMIHEDHQVIRQQAINQILDQIAVVLIQFLVTFIALIW 170
                   +  +      LIG L I  D Q +      Q+       L + L   + L  
Sbjct: 124 ISRPLYRPFYFEGSRQQQLIGSLTIFYDTQELANTLFGQLKVGFLATLARALFLTLVLSI 183

Query: 171 IVRRLVGKPLTDLSQALSEVRPDHDRKVAVAAEDHH--NEIGLVAKSINEFIDASHQALL 228
           +  R + +P+  +S+A+ ++ P+   +  +   D H  +E+GLV+  +N+ +        
Sbjct: 184 VFHRFLTQPIARISEAIDKIEPESPDENLLPISDAHKDDELGLVSTKLNQIL-------- 235

Query: 229 RERELRQQIERWESYYRTIAEQDTLTGLKNR-LGCEKFVLRKQRAST---TMVLLLIDLD 284
                  Q  + +S  R +A +D LTGL NR L  E   +  QRA     +  LL IDLD
Sbjct: 236 ------LQFGQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRARVHKRSFTLLFIDLD 289

Query: 285 GFKQVNDTLGHAAGDEVLREIAKRFYALAQTHFSDFVVGRLGGDEFAIYIPLDEF-VAES 343
            FK VND+LGHA GD+ L  IA+    L +       V RLGGDEF I    DE   A+ 
Sbjct: 290 RFKNVNDSLGHALGDQFLARIAR---LLERVVGDKGTVARLGGDEFVIL--ADEIHCADM 344

Query: 344 IERFAAQLIESSSEPIGLGQQSAQVGCSIGISHMNSLHIDLEKLLLQADKAMYWVKYRGK 403
              F  +L+   + PI LG  S     S+GIS         E L+  AD AMY  K  G 
Sbjct: 345 AADFVDKLLVQLNNPIQLGDHSIHPAASVGISLYPEDGNSAEDLIRHADIAMYSAKASGS 404

Query: 404 HGYHIYR 410
           + +  ++
Sbjct: 405 NQWAFFK 411